Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VRK2Q86Y07 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.41■□□□□ 0.22
VRK2Q86Y07 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
VRK2Q86Y07 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.41■□□□□ 0.22
VRK2Q86Y07 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.41■□□□□ 0.22
VRK2Q86Y07 AC005332.3-201ENST00000589904 676 ntBASIC16.41■□□□□ 0.22
VRK2Q86Y07 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.41■□□□□ 0.22
VRK2Q86Y07 LINC01451-201ENST00000623792 534 ntBASIC16.41■□□□□ 0.22
VRK2Q86Y07 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
VRK2Q86Y07 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VRK2Q86Y07 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VRK2Q86Y07 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VRK2Q86Y07 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.41■□□□□ 0.22
VRK2Q86Y07 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
VRK2Q86Y07 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
VRK2Q86Y07 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.41■□□□□ 0.22
VRK2Q86Y07 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VRK2Q86Y07 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
VRK2Q86Y07 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.4■□□□□ 0.22
VRK2Q86Y07 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VRK2Q86Y07 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
VRK2Q86Y07 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.4■□□□□ 0.22
VRK2Q86Y07 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VRK2Q86Y07 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.4■□□□□ 0.22
VRK2Q86Y07 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.4■□□□□ 0.22
VRK2Q86Y07 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VRK2Q86Y07 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.4■□□□□ 0.22
VRK2Q86Y07 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.4■□□□□ 0.22
VRK2Q86Y07 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.4■□□□□ 0.22
VRK2Q86Y07 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
VRK2Q86Y07 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VRK2Q86Y07 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VRK2Q86Y07 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.4■□□□□ 0.22
VRK2Q86Y07 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VRK2Q86Y07 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VRK2Q86Y07 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.4■□□□□ 0.22
VRK2Q86Y07 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VRK2Q86Y07 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.4■□□□□ 0.22
VRK2Q86Y07 MTCL1P1-201ENST00000446207 792 ntBASIC16.4■□□□□ 0.22
VRK2Q86Y07 RNF126P1-202ENST00000569893 925 ntBASIC16.4■□□□□ 0.22
VRK2Q86Y07 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.4■□□□□ 0.22
VRK2Q86Y07 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VRK2Q86Y07 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.4■□□□□ 0.22
VRK2Q86Y07 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
VRK2Q86Y07 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VRK2Q86Y07 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VRK2Q86Y07 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VRK2Q86Y07 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VRK2Q86Y07 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VRK2Q86Y07 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
VRK2Q86Y07 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
VRK2Q86Y07 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VRK2Q86Y07 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VRK2Q86Y07 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
VRK2Q86Y07 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
VRK2Q86Y07 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK2Q86Y07 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK2Q86Y07 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.39■□□□□ 0.21
VRK2Q86Y07 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK2Q86Y07 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.39■□□□□ 0.21
VRK2Q86Y07 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK2Q86Y07 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.39■□□□□ 0.21
VRK2Q86Y07 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.39■□□□□ 0.21
VRK2Q86Y07 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VRK2Q86Y07 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK2Q86Y07 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VRK2Q86Y07 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK2Q86Y07 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK2Q86Y07 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK2Q86Y07 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.39■□□□□ 0.21
VRK2Q86Y07 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.39■□□□□ 0.21
VRK2Q86Y07 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.39■□□□□ 0.21
VRK2Q86Y07 SPDYE13P-201ENST00000445314 798 ntBASIC16.39■□□□□ 0.21
VRK2Q86Y07 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.39■□□□□ 0.21
VRK2Q86Y07 AC068472.1-201ENST00000474589 881 ntBASIC16.39■□□□□ 0.21
VRK2Q86Y07 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VRK2Q86Y07 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.39■□□□□ 0.21
VRK2Q86Y07 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.39■□□□□ 0.21
VRK2Q86Y07 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK2Q86Y07 AL390719.2-201ENST00000606993 987 ntBASIC16.39■□□□□ 0.21
VRK2Q86Y07 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK2Q86Y07 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VRK2Q86Y07 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK2Q86Y07 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK2Q86Y07 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK2Q86Y07 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK2Q86Y07 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VRK2Q86Y07 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK2Q86Y07 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK2Q86Y07 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK2Q86Y07 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK2Q86Y07 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VRK2Q86Y07 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
VRK2Q86Y07 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VRK2Q86Y07 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.38■□□□□ 0.21
VRK2Q86Y07 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VRK2Q86Y07 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
VRK2Q86Y07 Z83836.1-201ENST00000624605 1642 ntBASIC16.38■□□□□ 0.21
VRK2Q86Y07 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VRK2Q86Y07 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms