Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF546Q86UE3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF546Q86UE3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
ZNF546Q86UE3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF546Q86UE3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.77□□□□□ -0.04
ZNF546Q86UE3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF546Q86UE3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.77□□□□□ -0.04
ZNF546Q86UE3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.77□□□□□ -0.04
ZNF546Q86UE3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
ZNF546Q86UE3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF546Q86UE3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
ZNF546Q86UE3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 AL162430.1-201ENST00000480705 870 ntBASIC14.77□□□□□ -0.05
ZNF546Q86UE3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 ANKRD20A6P-201ENST00000618763 204 ntBASIC14.77□□□□□ -0.05
ZNF546Q86UE3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF546Q86UE3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.76□□□□□ -0.05
ZNF546Q86UE3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 RARRES2P6-201ENST00000567333 442 ntBASIC14.76□□□□□ -0.05
ZNF546Q86UE3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 AC060766.5-201ENST00000590539 871 ntBASIC14.76□□□□□ -0.05
ZNF546Q86UE3 MIR5787-201ENST00000611784 55 ntBASIC14.76□□□□□ -0.05
ZNF546Q86UE3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 HLA-J-201ENST00000462773 1622 ntBASIC14.76□□□□□ -0.05
ZNF546Q86UE3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF546Q86UE3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 AC022188.1-201ENST00000620960 1664 ntBASIC14.75□□□□□ -0.05
ZNF546Q86UE3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms