Protein–RNA interactions for Protein: Q7Z404

TMC4, Transmembrane channel-like protein 4, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC4Q7Z404 AP002472.1-201ENST00000577490 586 ntBASIC21.5■■□□□ 1.03
TMC4Q7Z404 AC007064.4-201ENST00000637740 555 ntBASIC21.5■■□□□ 1.03
TMC4Q7Z404 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMC4Q7Z404 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.5■■□□□ 1.03
TMC4Q7Z404 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMC4Q7Z404 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMC4Q7Z404 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMC4Q7Z404 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.5■■□□□ 1.03
TMC4Q7Z404 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
TMC4Q7Z404 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMC4Q7Z404 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC21.5■■□□□ 1.03
TMC4Q7Z404 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMC4Q7Z404 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMC4Q7Z404 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TMC4Q7Z404 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMC4Q7Z404 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMC4Q7Z404 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMC4Q7Z404 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMC4Q7Z404 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMC4Q7Z404 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.49■■□□□ 1.03
TMC4Q7Z404 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.49■■□□□ 1.03
TMC4Q7Z404 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMC4Q7Z404 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMC4Q7Z404 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC21.49■■□□□ 1.03
TMC4Q7Z404 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMC4Q7Z404 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMC4Q7Z404 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMC4Q7Z404 CCND1-203ENST00000536559 553 ntTSL 3 BASIC21.49■■□□□ 1.03
TMC4Q7Z404 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TMC4Q7Z404 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC21.49■■□□□ 1.03
TMC4Q7Z404 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC21.49■■□□□ 1.03
TMC4Q7Z404 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMC4Q7Z404 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.49■■□□□ 1.03
TMC4Q7Z404 BCAR1-209ENST00000546196 1340 ntBASIC21.49■■□□□ 1.03
TMC4Q7Z404 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TMC4Q7Z404 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TMC4Q7Z404 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMC4Q7Z404 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMC4Q7Z404 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TMC4Q7Z404 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.48■■□□□ 1.03
TMC4Q7Z404 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TMC4Q7Z404 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.48■■□□□ 1.03
TMC4Q7Z404 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TMC4Q7Z404 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.48■■□□□ 1.03
TMC4Q7Z404 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.48■■□□□ 1.03
TMC4Q7Z404 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC21.48■■□□□ 1.03
TMC4Q7Z404 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.48■■□□□ 1.03
TMC4Q7Z404 AL645939.2-201ENST00000427340 991 ntBASIC21.48■■□□□ 1.03
TMC4Q7Z404 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC21.48■■□□□ 1.03
TMC4Q7Z404 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC21.48■■□□□ 1.03
TMC4Q7Z404 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC21.48■■□□□ 1.03
TMC4Q7Z404 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC21.48■■□□□ 1.03
TMC4Q7Z404 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC21.48■■□□□ 1.03
TMC4Q7Z404 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC21.48■■□□□ 1.03
TMC4Q7Z404 LINC02084-201ENST00000606069 1096 ntBASIC21.48■■□□□ 1.03
TMC4Q7Z404 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMC4Q7Z404 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TMC4Q7Z404 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
TMC4Q7Z404 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TMC4Q7Z404 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
TMC4Q7Z404 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
TMC4Q7Z404 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMC4Q7Z404 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TMC4Q7Z404 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMC4Q7Z404 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
TMC4Q7Z404 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.47■■□□□ 1.03
TMC4Q7Z404 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TMC4Q7Z404 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TMC4Q7Z404 AC100803.2-201ENST00000562459 1963 ntBASIC21.47■■□□□ 1.03
TMC4Q7Z404 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMC4Q7Z404 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.47■■□□□ 1.03
TMC4Q7Z404 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMC4Q7Z404 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TMC4Q7Z404 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMC4Q7Z404 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC21.47■■□□□ 1.03
TMC4Q7Z404 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMC4Q7Z404 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
TMC4Q7Z404 AC074386.1-202ENST00000463561 864 ntBASIC21.47■■□□□ 1.03
TMC4Q7Z404 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
TMC4Q7Z404 AP000344.2-201ENST00000512987 629 ntBASIC21.47■■□□□ 1.03
TMC4Q7Z404 PUS1-205ENST00000535067 838 ntTSL 3 BASIC21.47■■□□□ 1.03
TMC4Q7Z404 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC21.47■■□□□ 1.03
TMC4Q7Z404 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.47■■□□□ 1.03
TMC4Q7Z404 AC023141.13-201ENST00000604991 943 ntBASIC21.47■■□□□ 1.03
TMC4Q7Z404 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC21.47■■□□□ 1.03
TMC4Q7Z404 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TMC4Q7Z404 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TMC4Q7Z404 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TMC4Q7Z404 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMC4Q7Z404 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TMC4Q7Z404 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMC4Q7Z404 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMC4Q7Z404 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TMC4Q7Z404 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMC4Q7Z404 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMC4Q7Z404 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMC4Q7Z404 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
TMC4Q7Z404 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TMC4Q7Z404 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMC4Q7Z404 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms