Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
USP50Q70EL3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP50Q70EL3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP50Q70EL3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
USP50Q70EL3 ACTG1P4-201ENST00000425123 1122 ntBASIC20.75■□□□□ 0.91
USP50Q70EL3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC20.75■□□□□ 0.91
USP50Q70EL3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.75■□□□□ 0.91
USP50Q70EL3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.75■□□□□ 0.91
USP50Q70EL3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP50Q70EL3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.75■□□□□ 0.91
USP50Q70EL3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP50Q70EL3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP50Q70EL3 AL008721.1-201ENST00000609964 604 ntBASIC20.75■□□□□ 0.91
USP50Q70EL3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP50Q70EL3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP50Q70EL3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP50Q70EL3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
USP50Q70EL3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP50Q70EL3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
USP50Q70EL3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.75■□□□□ 0.91
USP50Q70EL3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.74■□□□□ 0.91
USP50Q70EL3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.74■□□□□ 0.91
USP50Q70EL3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP50Q70EL3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP50Q70EL3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
USP50Q70EL3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC20.74■□□□□ 0.91
USP50Q70EL3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.74■□□□□ 0.91
USP50Q70EL3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC20.74■□□□□ 0.91
USP50Q70EL3 FAM58DP-201ENST00000428076 619 ntBASIC20.74■□□□□ 0.91
USP50Q70EL3 AC140658.5-201ENST00000438532 169 ntBASIC20.74■□□□□ 0.91
USP50Q70EL3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP50Q70EL3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.74■□□□□ 0.91
USP50Q70EL3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP50Q70EL3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP50Q70EL3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.74■□□□□ 0.91
USP50Q70EL3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.74■□□□□ 0.91
USP50Q70EL3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP50Q70EL3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP50Q70EL3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.74■□□□□ 0.91
USP50Q70EL3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP50Q70EL3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
USP50Q70EL3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.74■□□□□ 0.91
USP50Q70EL3 BX276092.7-203ENST00000637198 1536 ntBASIC20.73■□□□□ 0.91
USP50Q70EL3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP50Q70EL3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP50Q70EL3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.73■□□□□ 0.91
USP50Q70EL3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.73■□□□□ 0.91
USP50Q70EL3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP50Q70EL3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.73■□□□□ 0.91
USP50Q70EL3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP50Q70EL3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP50Q70EL3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP50Q70EL3 BAD-202ENST00000394531 631 ntTSL 3 BASIC20.73■□□□□ 0.91
USP50Q70EL3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
USP50Q70EL3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC20.73■□□□□ 0.91
USP50Q70EL3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC20.73■□□□□ 0.91
USP50Q70EL3 AC125807.1-201ENST00000483097 614 ntBASIC20.73■□□□□ 0.91
USP50Q70EL3 AP005018.1-201ENST00000525475 301 ntBASIC20.73■□□□□ 0.91
USP50Q70EL3 CR383656.12-201ENST00000549567 513 ntBASIC20.73■□□□□ 0.91
USP50Q70EL3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.73■□□□□ 0.91
USP50Q70EL3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.73■□□□□ 0.91
USP50Q70EL3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.73■□□□□ 0.91
USP50Q70EL3 AC140878.1-201ENST00000565277 250 ntBASIC20.73■□□□□ 0.91
USP50Q70EL3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP50Q70EL3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP50Q70EL3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP50Q70EL3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.73■□□□□ 0.91
USP50Q70EL3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.73■□□□□ 0.91
USP50Q70EL3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP50Q70EL3 FO538757.1-201ENST00000623083 1397 ntBASIC20.72■□□□□ 0.91
USP50Q70EL3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP50Q70EL3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP50Q70EL3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP50Q70EL3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP50Q70EL3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP50Q70EL3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP50Q70EL3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP50Q70EL3 WRB-204ENST00000398753 699 ntTSL 3 BASIC20.72■□□□□ 0.91
USP50Q70EL3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC20.72■□□□□ 0.91
USP50Q70EL3 GPS2P2-201ENST00000430745 888 ntBASIC20.72■□□□□ 0.91
USP50Q70EL3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20.72■□□□□ 0.91
USP50Q70EL3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC20.72■□□□□ 0.91
USP50Q70EL3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC20.72■□□□□ 0.91
USP50Q70EL3 SLC25A39P2-201ENST00000537614 270 ntBASIC20.72■□□□□ 0.91
USP50Q70EL3 BAD-207ENST00000544785 525 ntTSL 3 BASIC20.72■□□□□ 0.91
USP50Q70EL3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.72■□□□□ 0.91
USP50Q70EL3 AC243562.1-201ENST00000560672 389 ntBASIC20.72■□□□□ 0.91
USP50Q70EL3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
USP50Q70EL3 AL358472.5-202ENST00000641448 1267 ntBASIC20.72■□□□□ 0.91
USP50Q70EL3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.72■□□□□ 0.91
USP50Q70EL3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.72■□□□□ 0.91
USP50Q70EL3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP50Q70EL3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP50Q70EL3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP50Q70EL3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP50Q70EL3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP50Q70EL3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
USP50Q70EL3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP50Q70EL3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP50Q70EL3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms