Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4R3CPQ6ZMV5 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PPP4R3CPQ6ZMV5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4R3CPQ6ZMV5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4R3CPQ6ZMV5 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
PPP4R3CPQ6ZMV5 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4R3CPQ6ZMV5 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4R3CPQ6ZMV5 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4R3CPQ6ZMV5 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.67■□□□□ 0.9
PPP4R3CPQ6ZMV5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4R3CPQ6ZMV5 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4R3CPQ6ZMV5 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 RNF152P1-201ENST00000397754 604 ntBASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 LINC02262-201ENST00000416680 735 ntTSL 3 BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 OR8K2P-201ENST00000524645 927 ntBASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 AC078878.1-201ENST00000539832 958 ntBASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 LRRC34P1-201ENST00000542742 915 ntBASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 AC140658.4-201ENST00000561990 352 ntBASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 AL445228.2-201ENST00000605589 952 ntBASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 AP002967.1-201ENST00000624203 539 ntBASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 AL031432.5-201ENST00000641059 760 ntBASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PPP4R3CPQ6ZMV5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 BX119904.4-201ENST00000424402 301 ntBASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 KRT18P35-201ENST00000510488 1269 ntBASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 S100Z-202ENST00000513010 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3CPQ6ZMV5 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
PPP4R3CPQ6ZMV5 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.64■□□□□ 0.9
PPP4R3CPQ6ZMV5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPP4R3CPQ6ZMV5 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.64■□□□□ 0.89
PPP4R3CPQ6ZMV5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPP4R3CPQ6ZMV5 ACAT1-202ENST00000299355 1345 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PPP4R3CPQ6ZMV5 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPP4R3CPQ6ZMV5 ARL14-201ENST00000320767 1294 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PPP4R3CPQ6ZMV5 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PPP4R3CPQ6ZMV5 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.64■□□□□ 0.89
PPP4R3CPQ6ZMV5 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.64■□□□□ 0.89
PPP4R3CPQ6ZMV5 AP000523.1-201ENST00000398242 1049 ntBASIC20.64■□□□□ 0.89
PPP4R3CPQ6ZMV5 FAM8A6P-201ENST00000407496 1135 ntBASIC20.64■□□□□ 0.89
PPP4R3CPQ6ZMV5 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC20.64■□□□□ 0.89
PPP4R3CPQ6ZMV5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.64■□□□□ 0.89
PPP4R3CPQ6ZMV5 AP001171.1-201ENST00000436373 864 ntTSL 2 BASIC20.64■□□□□ 0.89
PPP4R3CPQ6ZMV5 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.64■□□□□ 0.89
PPP4R3CPQ6ZMV5 KIZ-AS1-202ENST00000443753 1161 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PPP4R3CPQ6ZMV5 AC009947.2-201ENST00000444014 672 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms