Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF20Q5VTR2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
RNF20Q5VTR2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF20Q5VTR2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF20Q5VTR2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
RNF20Q5VTR2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF20Q5VTR2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF20Q5VTR2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF20Q5VTR2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF20Q5VTR2 RN7SL606P-201ENST00000472779 293 ntBASIC21.17■□□□□ 0.98
RNF20Q5VTR2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF20Q5VTR2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.17■□□□□ 0.98
RNF20Q5VTR2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF20Q5VTR2 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RNF20Q5VTR2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF20Q5VTR2 AL592071.1-201ENST00000611956 408 ntBASIC21.17■□□□□ 0.98
RNF20Q5VTR2 IGHV3-41-201ENST00000613121 348 ntBASIC21.17■□□□□ 0.98
RNF20Q5VTR2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.17■□□□□ 0.98
RNF20Q5VTR2 AC097374.2-201ENST00000618617 1306 ntBASIC21.17■□□□□ 0.98
RNF20Q5VTR2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF20Q5VTR2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF20Q5VTR2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF20Q5VTR2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
RNF20Q5VTR2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF20Q5VTR2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF20Q5VTR2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF20Q5VTR2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC21.17■□□□□ 0.98
RNF20Q5VTR2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 AC005332.1-201ENST00000577698 1310 ntBASIC21.16■□□□□ 0.98
RNF20Q5VTR2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 AC124864.1-201ENST00000623408 392 ntBASIC21.16■□□□□ 0.98
RNF20Q5VTR2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF20Q5VTR2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF20Q5VTR2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF20Q5VTR2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF20Q5VTR2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF20Q5VTR2 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF20Q5VTR2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF20Q5VTR2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.15■□□□□ 0.98
RNF20Q5VTR2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
RNF20Q5VTR2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF20Q5VTR2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF20Q5VTR2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF20Q5VTR2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF20Q5VTR2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RNF20Q5VTR2 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF20Q5VTR2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.15■□□□□ 0.98
RNF20Q5VTR2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RNF20Q5VTR2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF20Q5VTR2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RNF20Q5VTR2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF20Q5VTR2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF20Q5VTR2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF20Q5VTR2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF20Q5VTR2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF20Q5VTR2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF20Q5VTR2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF20Q5VTR2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC21.14■□□□□ 0.98
RNF20Q5VTR2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF20Q5VTR2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms