Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CDC42BPAQ5VT25 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CDC42BPAQ5VT25 MIR770-201ENST00000390219 98 ntBASIC26.56■■□□□ 1.84
CDC42BPAQ5VT25 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
CDC42BPAQ5VT25 FALEC-201ENST00000416894 566 ntTSL 3 BASIC26.56■■□□□ 1.84
CDC42BPAQ5VT25 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC26.56■■□□□ 1.84
CDC42BPAQ5VT25 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC26.56■■□□□ 1.84
CDC42BPAQ5VT25 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC26.56■■□□□ 1.84
CDC42BPAQ5VT25 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
CDC42BPAQ5VT25 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CDC42BPAQ5VT25 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CDC42BPAQ5VT25 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CDC42BPAQ5VT25 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC26.56■■□□□ 1.84
CDC42BPAQ5VT25 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CDC42BPAQ5VT25 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
CDC42BPAQ5VT25 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC26.56■■□□□ 1.84
CDC42BPAQ5VT25 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CDC42BPAQ5VT25 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CDC42BPAQ5VT25 AC074386.1-202ENST00000463561 864 ntBASIC26.56■■□□□ 1.84
CDC42BPAQ5VT25 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC26.56■■□□□ 1.84
CDC42BPAQ5VT25 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC26.56■■□□□ 1.84
CDC42BPAQ5VT25 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
CDC42BPAQ5VT25 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CDC42BPAQ5VT25 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC26.56■■□□□ 1.84
CDC42BPAQ5VT25 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC26.55■■□□□ 1.84
CDC42BPAQ5VT25 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC26.55■■□□□ 1.84
CDC42BPAQ5VT25 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
CDC42BPAQ5VT25 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC26.55■■□□□ 1.84
CDC42BPAQ5VT25 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CDC42BPAQ5VT25 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC26.55■■□□□ 1.84
CDC42BPAQ5VT25 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC26.55■■□□□ 1.84
CDC42BPAQ5VT25 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC26.55■■□□□ 1.84
CDC42BPAQ5VT25 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
CDC42BPAQ5VT25 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
CDC42BPAQ5VT25 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CDC42BPAQ5VT25 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CDC42BPAQ5VT25 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
CDC42BPAQ5VT25 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC26.55■■□□□ 1.84
CDC42BPAQ5VT25 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC26.55■■□□□ 1.84
CDC42BPAQ5VT25 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CDC42BPAQ5VT25 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CDC42BPAQ5VT25 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDC42BPAQ5VT25 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CDC42BPAQ5VT25 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CDC42BPAQ5VT25 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC26.54■■□□□ 1.84
CDC42BPAQ5VT25 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDC42BPAQ5VT25 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
CDC42BPAQ5VT25 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CDC42BPAQ5VT25 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC26.54■■□□□ 1.84
CDC42BPAQ5VT25 CFL1-212ENST00000531413 636 ntTSL 3 BASIC26.54■■□□□ 1.84
CDC42BPAQ5VT25 AC093520.2-201ENST00000561830 333 ntBASIC26.54■■□□□ 1.84
CDC42BPAQ5VT25 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDC42BPAQ5VT25 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDC42BPAQ5VT25 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC26.54■■□□□ 1.84
CDC42BPAQ5VT25 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDC42BPAQ5VT25 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC26.54■■□□□ 1.84
CDC42BPAQ5VT25 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC26.54■■□□□ 1.84
CDC42BPAQ5VT25 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDC42BPAQ5VT25 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDC42BPAQ5VT25 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
CDC42BPAQ5VT25 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
CDC42BPAQ5VT25 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC26.54■■□□□ 1.84
CDC42BPAQ5VT25 REM2-202ENST00000536884 1331 ntTSL 2 BASIC26.54■■□□□ 1.84
CDC42BPAQ5VT25 WDR53-203ENST00000429115 683 ntTSL 2 BASIC26.53■■□□□ 1.84
CDC42BPAQ5VT25 AL513480.1-201ENST00000451731 511 ntBASIC26.53■■□□□ 1.84
CDC42BPAQ5VT25 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CDC42BPAQ5VT25 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC26.53■■□□□ 1.84
CDC42BPAQ5VT25 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CDC42BPAQ5VT25 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CDC42BPAQ5VT25 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CDC42BPAQ5VT25 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CDC42BPAQ5VT25 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
CDC42BPAQ5VT25 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC26.53■■□□□ 1.84
CDC42BPAQ5VT25 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CDC42BPAQ5VT25 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CDC42BPAQ5VT25 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC26.53■■□□□ 1.84
CDC42BPAQ5VT25 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CDC42BPAQ5VT25 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC26.53■■□□□ 1.84
CDC42BPAQ5VT25 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CDC42BPAQ5VT25 AC105339.1-204ENST00000636249 355 ntBASIC26.53■■□□□ 1.84
CDC42BPAQ5VT25 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
CDC42BPAQ5VT25 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CDC42BPAQ5VT25 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 SYS1-203ENST00000414310 795 ntTSL 3 BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 AL627223.1-201ENST00000416693 442 ntBASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 HLA-J-203ENST00000494367 1087 ntBASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms