Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 AC092068.3-201ENST00000587894 2016 ntBASIC16.21■□□□□ 0.18
RBM48Q5RL73 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RBM48Q5RL73 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RBM48Q5RL73 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBM48Q5RL73 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.2■□□□□ 0.18
RBM48Q5RL73 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.2■□□□□ 0.18
RBM48Q5RL73 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
RBM48Q5RL73 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBM48Q5RL73 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.2■□□□□ 0.18
RBM48Q5RL73 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBM48Q5RL73 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RBM48Q5RL73 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBM48Q5RL73 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RBM48Q5RL73 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.2■□□□□ 0.18
RBM48Q5RL73 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RBM48Q5RL73 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBM48Q5RL73 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.2■□□□□ 0.18
RBM48Q5RL73 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.2■□□□□ 0.18
RBM48Q5RL73 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.2■□□□□ 0.18
RBM48Q5RL73 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RBM48Q5RL73 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBM48Q5RL73 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.2■□□□□ 0.18
RBM48Q5RL73 POM121L13P-201ENST00000422362 380 ntBASIC16.2■□□□□ 0.18
RBM48Q5RL73 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.2■□□□□ 0.18
RBM48Q5RL73 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.2■□□□□ 0.18
RBM48Q5RL73 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBM48Q5RL73 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBM48Q5RL73 AC007950.2-201ENST00000615045 2347 ntBASIC16.2■□□□□ 0.18
RBM48Q5RL73 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RBM48Q5RL73 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBM48Q5RL73 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.2■□□□□ 0.18
RBM48Q5RL73 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBM48Q5RL73 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBM48Q5RL73 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBM48Q5RL73 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBM48Q5RL73 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBM48Q5RL73 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
RBM48Q5RL73 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBM48Q5RL73 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RBM48Q5RL73 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RBM48Q5RL73 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RBM48Q5RL73 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.19■□□□□ 0.18
RBM48Q5RL73 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RBM48Q5RL73 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.19■□□□□ 0.18
RBM48Q5RL73 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RBM48Q5RL73 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
RBM48Q5RL73 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RBM48Q5RL73 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RBM48Q5RL73 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.19■□□□□ 0.18
RBM48Q5RL73 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.19■□□□□ 0.18
RBM48Q5RL73 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RBM48Q5RL73 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RBM48Q5RL73 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.19■□□□□ 0.18
RBM48Q5RL73 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RBM48Q5RL73 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RBM48Q5RL73 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.19■□□□□ 0.18
RBM48Q5RL73 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.19■□□□□ 0.18
RBM48Q5RL73 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RBM48Q5RL73 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RBM48Q5RL73 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.19■□□□□ 0.18
RBM48Q5RL73 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.19■□□□□ 0.18
RBM48Q5RL73 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RBM48Q5RL73 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.19■□□□□ 0.18
RBM48Q5RL73 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RBM48Q5RL73 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.19■□□□□ 0.18
RBM48Q5RL73 IKBKGP1-201ENST00000612193 1073 ntBASIC16.19■□□□□ 0.18
RBM48Q5RL73 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.19■□□□□ 0.18
RBM48Q5RL73 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RBM48Q5RL73 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
RBM48Q5RL73 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.19■□□□□ 0.18
RBM48Q5RL73 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RBM48Q5RL73 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.19■□□□□ 0.18
RBM48Q5RL73 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.19■□□□□ 0.18
RBM48Q5RL73 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RBM48Q5RL73 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RBM48Q5RL73 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
RBM48Q5RL73 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RBM48Q5RL73 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RBM48Q5RL73 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RBM48Q5RL73 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RBM48Q5RL73 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.19■□□□□ 0.18
RBM48Q5RL73 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.19■□□□□ 0.18
RBM48Q5RL73 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RBM48Q5RL73 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RBM48Q5RL73 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RBM48Q5RL73 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RBM48Q5RL73 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RBM48Q5RL73 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RBM48Q5RL73 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RBM48Q5RL73 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RBM48Q5RL73 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RBM48Q5RL73 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RBM48Q5RL73 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RBM48Q5RL73 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.18■□□□□ 0.18
RBM48Q5RL73 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.18■□□□□ 0.18
RBM48Q5RL73 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.18■□□□□ 0.18
RBM48Q5RL73 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RBM48Q5RL73 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.18■□□□□ 0.18
RBM48Q5RL73 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.18■□□□□ 0.18
RBM48Q5RL73 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms