Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CBX1P83916 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CBX1P83916 BANP-203ENST00000393207 2438 ntTSL 2 BASIC18.55■□□□□ 0.56
CBX1P83916 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CBX1P83916 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CBX1P83916 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX1P83916 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CBX1P83916 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX1P83916 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CBX1P83916 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX1P83916 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CBX1P83916 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX1P83916 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX1P83916 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX1P83916 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CBX1P83916 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.55■□□□□ 0.56
CBX1P83916 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX1P83916 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX1P83916 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
CBX1P83916 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.55■□□□□ 0.56
CBX1P83916 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.55■□□□□ 0.56
CBX1P83916 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.55■□□□□ 0.56
CBX1P83916 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.55■□□□□ 0.56
CBX1P83916 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX1P83916 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX1P83916 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX1P83916 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC18.55■□□□□ 0.56
CBX1P83916 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CBX1P83916 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CBX1P83916 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CBX1P83916 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC18.55■□□□□ 0.56
CBX1P83916 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX1P83916 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX1P83916 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX1P83916 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CBX1P83916 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX1P83916 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.54■□□□□ 0.56
CBX1P83916 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CBX1P83916 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX1P83916 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.54■□□□□ 0.56
CBX1P83916 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CBX1P83916 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CBX1P83916 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX1P83916 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX1P83916 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX1P83916 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CBX1P83916 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.54■□□□□ 0.56
CBX1P83916 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX1P83916 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX1P83916 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX1P83916 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX1P83916 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.54■□□□□ 0.56
CBX1P83916 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX1P83916 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.54■□□□□ 0.56
CBX1P83916 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.54■□□□□ 0.56
CBX1P83916 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.54■□□□□ 0.56
CBX1P83916 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.54■□□□□ 0.56
CBX1P83916 AP001160.3-201ENST00000601484 763 ntBASIC18.54■□□□□ 0.56
CBX1P83916 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX1P83916 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX1P83916 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX1P83916 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX1P83916 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX1P83916 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC18.54■□□□□ 0.56
CBX1P83916 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX1P83916 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.54■□□□□ 0.56
CBX1P83916 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX1P83916 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBX1P83916 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CBX1P83916 AC078925.2-201ENST00000624013 1973 ntBASIC18.53■□□□□ 0.56
CBX1P83916 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.53■□□□□ 0.56
CBX1P83916 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.53■□□□□ 0.56
CBX1P83916 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBX1P83916 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CBX1P83916 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBX1P83916 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CBX1P83916 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBX1P83916 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBX1P83916 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBX1P83916 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBX1P83916 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBX1P83916 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.53■□□□□ 0.56
CBX1P83916 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.53■□□□□ 0.56
CBX1P83916 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.53■□□□□ 0.56
CBX1P83916 SLC7A5P1-201ENST00000568957 537 ntBASIC18.53■□□□□ 0.56
CBX1P83916 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.53■□□□□ 0.56
CBX1P83916 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CBX1P83916 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.53■□□□□ 0.56
CBX1P83916 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CBX1P83916 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.53■□□□□ 0.56
CBX1P83916 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.53■□□□□ 0.56
CBX1P83916 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBX1P83916 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBX1P83916 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CBX1P83916 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBX1P83916 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.53■□□□□ 0.56
CBX1P83916 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBX1P83916 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CBX1P83916 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBX1P83916 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms