Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC12.47□□□□□ -0.41
CKS1BP61024 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CKS1BP61024 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC12.47□□□□□ -0.41
CKS1BP61024 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC12.47□□□□□ -0.41
CKS1BP61024 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CKS1BP61024 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
CKS1BP61024 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC12.47□□□□□ -0.41
CKS1BP61024 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.47□□□□□ -0.41
CKS1BP61024 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
CKS1BP61024 NORAD-201ENST00000565493 5339 ntBASIC12.47□□□□□ -0.41
CKS1BP61024 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CKS1BP61024 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CKS1BP61024 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CKS1BP61024 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CKS1BP61024 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CKS1BP61024 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CKS1BP61024 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CKS1BP61024 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.46□□□□□ -0.41
CKS1BP61024 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC12.46□□□□□ -0.41
CKS1BP61024 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CKS1BP61024 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CKS1BP61024 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC12.46□□□□□ -0.41
CKS1BP61024 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC12.46□□□□□ -0.41
CKS1BP61024 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CKS1BP61024 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
CKS1BP61024 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CKS1BP61024 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CKS1BP61024 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CKS1BP61024 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CKS1BP61024 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CKS1BP61024 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
CKS1BP61024 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CKS1BP61024 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC12.46□□□□□ -0.41
CKS1BP61024 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
CKS1BP61024 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC12.46□□□□□ -0.41
CKS1BP61024 POM121L13P-201ENST00000422362 380 ntBASIC12.46□□□□□ -0.41
CKS1BP61024 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CKS1BP61024 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC12.46□□□□□ -0.41
CKS1BP61024 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC12.46□□□□□ -0.41
CKS1BP61024 THEM4-205ENST00000489410 643 ntTSL 2 BASIC12.46□□□□□ -0.41
CKS1BP61024 PPP1R14BP3-201ENST00000509033 445 ntBASIC12.46□□□□□ -0.41
CKS1BP61024 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC12.46□□□□□ -0.41
CKS1BP61024 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC12.46□□□□□ -0.41
CKS1BP61024 HLA-A-209ENST00000638375 975 ntBASIC12.46□□□□□ -0.41
CKS1BP61024 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC12.46□□□□□ -0.41
CKS1BP61024 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CKS1BP61024 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CKS1BP61024 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CKS1BP61024 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CKS1BP61024 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CKS1BP61024 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.46□□□□□ -0.42
CKS1BP61024 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.46□□□□□ -0.42
CKS1BP61024 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CKS1BP61024 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CKS1BP61024 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CKS1BP61024 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CKS1BP61024 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.42
CKS1BP61024 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CKS1BP61024 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
CKS1BP61024 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
CKS1BP61024 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CKS1BP61024 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CKS1BP61024 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC12.46□□□□□ -0.42
CKS1BP61024 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC12.46□□□□□ -0.42
CKS1BP61024 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CKS1BP61024 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CKS1BP61024 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CKS1BP61024 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CKS1BP61024 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC12.45□□□□□ -0.42
CKS1BP61024 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CKS1BP61024 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.45□□□□□ -0.42
CKS1BP61024 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC12.45□□□□□ -0.42
CKS1BP61024 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CKS1BP61024 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CKS1BP61024 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CKS1BP61024 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.45□□□□□ -0.42
CKS1BP61024 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CKS1BP61024 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.45□□□□□ -0.42
CKS1BP61024 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
CKS1BP61024 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CKS1BP61024 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC12.45□□□□□ -0.42
CKS1BP61024 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.45□□□□□ -0.42
CKS1BP61024 ACE-204ENST00000428043 5120 ntTSL 2 BASIC12.45□□□□□ -0.42
CKS1BP61024 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
CKS1BP61024 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CKS1BP61024 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms