Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS3P61009 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS3P61009 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS3P61009 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS3P61009 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS3P61009 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SPCS3P61009 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SPCS3P61009 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.46□□□□□ -0.09
SPCS3P61009 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS3P61009 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS3P61009 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS3P61009 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SPCS3P61009 RPS2P55-201ENST00000397318 883 ntBASIC14.46□□□□□ -0.09
SPCS3P61009 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS3P61009 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS3P61009 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS3P61009 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SPCS3P61009 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.46□□□□□ -0.09
SPCS3P61009 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS3P61009 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS3P61009 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS3P61009 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS3P61009 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.46□□□□□ -0.09
SPCS3P61009 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS3P61009 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS3P61009 FAM201B-201ENST00000458407 597 ntBASIC14.46□□□□□ -0.09
SPCS3P61009 AC107956.1-201ENST00000494359 873 ntBASIC14.46□□□□□ -0.09
SPCS3P61009 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.46□□□□□ -0.09
SPCS3P61009 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS3P61009 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.46□□□□□ -0.09
SPCS3P61009 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.46□□□□□ -0.09
SPCS3P61009 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS3P61009 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.46□□□□□ -0.09
SPCS3P61009 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.46□□□□□ -0.09
SPCS3P61009 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.46□□□□□ -0.09
SPCS3P61009 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SPCS3P61009 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS3P61009 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS3P61009 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS3P61009 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS3P61009 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS3P61009 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SPCS3P61009 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SPCS3P61009 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.46□□□□□ -0.1
SPCS3P61009 LINC00554-201ENST00000564841 3011 ntBASIC14.46□□□□□ -0.1
SPCS3P61009 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
SPCS3P61009 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
SPCS3P61009 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.46□□□□□ -0.1
SPCS3P61009 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.46□□□□□ -0.1
SPCS3P61009 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC14.46□□□□□ -0.1
SPCS3P61009 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
SPCS3P61009 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SPCS3P61009 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SPCS3P61009 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.45□□□□□ -0.1
SPCS3P61009 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS3P61009 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS3P61009 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS3P61009 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.45□□□□□ -0.1
SPCS3P61009 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.45□□□□□ -0.1
SPCS3P61009 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS3P61009 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS3P61009 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS3P61009 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SPCS3P61009 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS3P61009 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.45□□□□□ -0.1
SPCS3P61009 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.45□□□□□ -0.1
SPCS3P61009 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS3P61009 AC012618.2-201ENST00000428058 849 ntBASIC14.45□□□□□ -0.1
SPCS3P61009 CCR12P-201ENST00000446203 998 ntBASIC14.45□□□□□ -0.1
SPCS3P61009 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS3P61009 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS3P61009 BX088651.1-201ENST00000540551 451 ntBASIC14.45□□□□□ -0.1
SPCS3P61009 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SPCS3P61009 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.45□□□□□ -0.1
SPCS3P61009 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.45□□□□□ -0.1
SPCS3P61009 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SPCS3P61009 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.45□□□□□ -0.1
SPCS3P61009 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.45□□□□□ -0.1
SPCS3P61009 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.45□□□□□ -0.1
SPCS3P61009 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SPCS3P61009 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SPCS3P61009 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SPCS3P61009 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SPCS3P61009 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS3P61009 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS3P61009 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS3P61009 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SPCS3P61009 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SPCS3P61009 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS3P61009 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS3P61009 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS3P61009 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.45□□□□□ -0.1
SPCS3P61009 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.45□□□□□ -0.1
SPCS3P61009 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS3P61009 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SPCS3P61009 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS3P61009 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS3P61009 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.44□□□□□ -0.1
SPCS3P61009 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS3P61009 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms