Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S2P56377 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S2P56377 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S2P56377 VENTXP7-201ENST00000475503 772 ntBASIC17.27■□□□□ 0.36
AP1S2P56377 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.27■□□□□ 0.36
AP1S2P56377 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S2P56377 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.27■□□□□ 0.36
AP1S2P56377 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S2P56377 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
AP1S2P56377 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S2P56377 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
AP1S2P56377 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
AP1S2P56377 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
AP1S2P56377 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.27■□□□□ 0.35
AP1S2P56377 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.27■□□□□ 0.35
AP1S2P56377 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.27■□□□□ 0.35
AP1S2P56377 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
AP1S2P56377 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
AP1S2P56377 IER3-202ENST00000376377 1350 ntBASIC17.27■□□□□ 0.35
AP1S2P56377 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
AP1S2P56377 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S2P56377 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S2P56377 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.26■□□□□ 0.35
AP1S2P56377 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.26■□□□□ 0.35
AP1S2P56377 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S2P56377 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S2P56377 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
AP1S2P56377 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.26■□□□□ 0.35
AP1S2P56377 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.26■□□□□ 0.35
AP1S2P56377 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S2P56377 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.26■□□□□ 0.35
AP1S2P56377 COX5BP2-201ENST00000392354 334 ntBASIC17.26■□□□□ 0.35
AP1S2P56377 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.26■□□□□ 0.35
AP1S2P56377 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S2P56377 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.26■□□□□ 0.35
AP1S2P56377 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.26■□□□□ 0.35
AP1S2P56377 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S2P56377 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.26■□□□□ 0.35
AP1S2P56377 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S2P56377 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.26■□□□□ 0.35
AP1S2P56377 AP000550.4-202ENST00000639755 178 ntBASIC17.26■□□□□ 0.35
AP1S2P56377 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S2P56377 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.26■□□□□ 0.35
AP1S2P56377 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S2P56377 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S2P56377 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S2P56377 AC016734.2-201ENST00000624325 1377 ntBASIC17.26■□□□□ 0.35
AP1S2P56377 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S2P56377 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S2P56377 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.26■□□□□ 0.35
AP1S2P56377 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S2P56377 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S2P56377 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S2P56377 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S2P56377 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S2P56377 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S2P56377 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S2P56377 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
AP1S2P56377 AC125634.1-201ENST00000438758 1403 ntBASIC17.25■□□□□ 0.35
AP1S2P56377 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S2P56377 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S2P56377 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S2P56377 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S2P56377 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S2P56377 AL845331.1-201ENST00000424978 1190 ntBASIC17.25■□□□□ 0.35
AP1S2P56377 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.25■□□□□ 0.35
AP1S2P56377 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S2P56377 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
AP1S2P56377 AL138831.2-201ENST00000606564 490 ntBASIC17.25■□□□□ 0.35
AP1S2P56377 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S2P56377 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S2P56377 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
AP1S2P56377 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S2P56377 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.25■□□□□ 0.35
AP1S2P56377 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S2P56377 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S2P56377 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S2P56377 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.25■□□□□ 0.35
AP1S2P56377 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.25■□□□□ 0.35
AP1S2P56377 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
AP1S2P56377 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.25■□□□□ 0.35
AP1S2P56377 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.25■□□□□ 0.35
AP1S2P56377 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S2P56377 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
AP1S2P56377 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.24■□□□□ 0.35
AP1S2P56377 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
AP1S2P56377 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.24■□□□□ 0.35
AP1S2P56377 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S2P56377 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S2P56377 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
AP1S2P56377 TSSC2-201ENST00000450217 709 ntBASIC17.24■□□□□ 0.35
AP1S2P56377 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.24■□□□□ 0.35
AP1S2P56377 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.24■□□□□ 0.35
AP1S2P56377 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.24■□□□□ 0.35
AP1S2P56377 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S2P56377 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S2P56377 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S2P56377 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.24■□□□□ 0.35
AP1S2P56377 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S2P56377 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms