Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.51■□□□□ 0.39
CDKN2DP55273 LINC01238-205ENST00000567549 1107 ntBASIC17.51■□□□□ 0.39
CDKN2DP55273 AP001094.4-201ENST00000579008 2176 ntBASIC17.51■□□□□ 0.39
CDKN2DP55273 BCL2-203ENST00000589955 5011 ntBASIC17.51■□□□□ 0.39
CDKN2DP55273 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDKN2DP55273 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.51■□□□□ 0.39
CDKN2DP55273 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CDKN2DP55273 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDKN2DP55273 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CDKN2DP55273 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKN2DP55273 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKN2DP55273 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDKN2DP55273 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.51■□□□□ 0.39
CDKN2DP55273 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDKN2DP55273 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKN2DP55273 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.5■□□□□ 0.39
CDKN2DP55273 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKN2DP55273 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKN2DP55273 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKN2DP55273 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CDKN2DP55273 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKN2DP55273 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKN2DP55273 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKN2DP55273 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.5■□□□□ 0.39
CDKN2DP55273 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKN2DP55273 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKN2DP55273 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.5■□□□□ 0.39
CDKN2DP55273 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKN2DP55273 AC010460.3-201ENST00000511359 1579 ntBASIC17.5■□□□□ 0.39
CDKN2DP55273 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDKN2DP55273 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDKN2DP55273 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKN2DP55273 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDKN2DP55273 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.5■□□□□ 0.39
CDKN2DP55273 TSPY22P-201ENST00000427496 604 ntBASIC17.5■□□□□ 0.39
CDKN2DP55273 AC005104.2-201ENST00000427818 678 ntBASIC17.5■□□□□ 0.39
CDKN2DP55273 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
CDKN2DP55273 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.5■□□□□ 0.39
CDKN2DP55273 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDKN2DP55273 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDKN2DP55273 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKN2DP55273 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.5■□□□□ 0.39
CDKN2DP55273 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKN2DP55273 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.5■□□□□ 0.39
CDKN2DP55273 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKN2DP55273 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDKN2DP55273 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CDKN2DP55273 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKN2DP55273 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKN2DP55273 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKN2DP55273 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKN2DP55273 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKN2DP55273 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKN2DP55273 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDKN2DP55273 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKN2DP55273 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKN2DP55273 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKN2DP55273 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKN2DP55273 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKN2DP55273 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CDKN2DP55273 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.49■□□□□ 0.39
CDKN2DP55273 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.49■□□□□ 0.39
CDKN2DP55273 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDKN2DP55273 RN7SL606P-201ENST00000472779 293 ntBASIC17.49■□□□□ 0.39
CDKN2DP55273 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CDKN2DP55273 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CDKN2DP55273 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
CDKN2DP55273 AC011498.5-201ENST00000592027 486 ntBASIC17.49■□□□□ 0.39
CDKN2DP55273 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CDKN2DP55273 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.49■□□□□ 0.39
CDKN2DP55273 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDKN2DP55273 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKN2DP55273 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKN2DP55273 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKN2DP55273 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.49■□□□□ 0.39
CDKN2DP55273 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKN2DP55273 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKN2DP55273 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDKN2DP55273 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDKN2DP55273 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKN2DP55273 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKN2DP55273 LYSMD4-203ENST00000378904 2122 ntBASIC17.48■□□□□ 0.39
CDKN2DP55273 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CDKN2DP55273 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKN2DP55273 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.48■□□□□ 0.39
CDKN2DP55273 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CDKN2DP55273 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDKN2DP55273 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKN2DP55273 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CDKN2DP55273 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.48■□□□□ 0.39
CDKN2DP55273 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDKN2DP55273 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKN2DP55273 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.48■□□□□ 0.39
CDKN2DP55273 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKN2DP55273 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKN2DP55273 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDKN2DP55273 AL031133.1-201ENST00000406807 723 ntBASIC17.48■□□□□ 0.39
CDKN2DP55273 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.48■□□□□ 0.39
CDKN2DP55273 AL845331.1-201ENST00000424978 1190 ntBASIC17.48■□□□□ 0.39
CDKN2DP55273 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms