Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
PSMD4P55036 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.54■□□□□ 0.24
PSMD4P55036 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
PSMD4P55036 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.54■□□□□ 0.24
PSMD4P55036 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PSMD4P55036 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PSMD4P55036 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PSMD4P55036 IER3-202ENST00000376377 1350 ntBASIC16.54■□□□□ 0.24
PSMD4P55036 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PSMD4P55036 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.54■□□□□ 0.24
PSMD4P55036 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.54■□□□□ 0.24
PSMD4P55036 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.54■□□□□ 0.24
PSMD4P55036 AL133373.2-201ENST00000623187 2828 ntBASIC16.54■□□□□ 0.24
PSMD4P55036 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PSMD4P55036 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
PSMD4P55036 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PSMD4P55036 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.54■□□□□ 0.24
PSMD4P55036 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PSMD4P55036 AC112698.1-201ENST00000510299 916 ntBASIC16.54■□□□□ 0.24
PSMD4P55036 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.54■□□□□ 0.24
PSMD4P55036 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.54■□□□□ 0.24
PSMD4P55036 AC116407.4-201ENST00000623319 1061 ntBASIC16.54■□□□□ 0.24
PSMD4P55036 AP000550.4-202ENST00000639755 178 ntBASIC16.54■□□□□ 0.24
PSMD4P55036 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.54■□□□□ 0.24
PSMD4P55036 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PSMD4P55036 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PSMD4P55036 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PSMD4P55036 AC006116.8-202ENST00000587620 1550 ntBASIC16.54■□□□□ 0.24
PSMD4P55036 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PSMD4P55036 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.54■□□□□ 0.24
PSMD4P55036 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.54■□□□□ 0.24
PSMD4P55036 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PSMD4P55036 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSMD4P55036 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.53■□□□□ 0.24
PSMD4P55036 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSMD4P55036 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSMD4P55036 PKD1P5-201ENST00000532415 10291 ntBASIC16.53■□□□□ 0.24
PSMD4P55036 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSMD4P55036 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSMD4P55036 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
PSMD4P55036 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSMD4P55036 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.53■□□□□ 0.24
PSMD4P55036 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PSMD4P55036 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.53■□□□□ 0.24
PSMD4P55036 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PSMD4P55036 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PSMD4P55036 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSMD4P55036 MTCL1P1-201ENST00000446207 792 ntBASIC16.53■□□□□ 0.24
PSMD4P55036 AC068472.1-201ENST00000474589 881 ntBASIC16.53■□□□□ 0.24
PSMD4P55036 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.53■□□□□ 0.24
PSMD4P55036 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.53■□□□□ 0.24
PSMD4P55036 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.53■□□□□ 0.24
PSMD4P55036 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.53■□□□□ 0.24
PSMD4P55036 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.53■□□□□ 0.24
PSMD4P55036 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSMD4P55036 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.53■□□□□ 0.24
PSMD4P55036 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.53■□□□□ 0.24
PSMD4P55036 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.53■□□□□ 0.24
PSMD4P55036 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PSMD4P55036 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PSMD4P55036 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSMD4P55036 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PSMD4P55036 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PSMD4P55036 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSMD4P55036 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.53■□□□□ 0.24
PSMD4P55036 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.53■□□□□ 0.24
PSMD4P55036 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PSMD4P55036 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PSMD4P55036 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSMD4P55036 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSMD4P55036 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PSMD4P55036 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSMD4P55036 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PSMD4P55036 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PSMD4P55036 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PSMD4P55036 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.52■□□□□ 0.24
PSMD4P55036 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PSMD4P55036 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.52■□□□□ 0.24
PSMD4P55036 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PSMD4P55036 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.52■□□□□ 0.24
PSMD4P55036 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PSMD4P55036 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.52■□□□□ 0.24
PSMD4P55036 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.52■□□□□ 0.24
PSMD4P55036 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PSMD4P55036 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PSMD4P55036 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PSMD4P55036 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PSMD4P55036 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PSMD4P55036 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PSMD4P55036 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.52■□□□□ 0.24
PSMD4P55036 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.52■□□□□ 0.24
PSMD4P55036 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.52■□□□□ 0.24
PSMD4P55036 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.52■□□□□ 0.24
PSMD4P55036 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.52■□□□□ 0.24
PSMD4P55036 VENTXP7-201ENST00000475503 772 ntBASIC16.52■□□□□ 0.24
PSMD4P55036 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.52■□□□□ 0.24
PSMD4P55036 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PSMD4P55036 AL445228.2-201ENST00000605589 952 ntBASIC16.52■□□□□ 0.24
PSMD4P55036 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PSMD4P55036 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms