Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE1AP54750 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC21.63■■□□□ 1.05
PDE1AP54750 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PDE1AP54750 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.63■■□□□ 1.05
PDE1AP54750 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.63■■□□□ 1.05
PDE1AP54750 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDE1AP54750 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PDE1AP54750 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.63■■□□□ 1.05
PDE1AP54750 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.63■■□□□ 1.05
PDE1AP54750 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE1AP54750 LYSMD4-203ENST00000378904 2122 ntBASIC21.63■■□□□ 1.05
PDE1AP54750 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PDE1AP54750 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PDE1AP54750 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PDE1AP54750 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE1AP54750 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE1AP54750 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
PDE1AP54750 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE1AP54750 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.63■■□□□ 1.05
PDE1AP54750 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDE1AP54750 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.63■■□□□ 1.05
PDE1AP54750 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE1AP54750 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE1AP54750 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE1AP54750 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE1AP54750 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE1AP54750 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE1AP54750 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC21.63■■□□□ 1.05
PDE1AP54750 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
PDE1AP54750 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDE1AP54750 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PDE1AP54750 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PDE1AP54750 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PDE1AP54750 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC21.62■■□□□ 1.05
PDE1AP54750 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
PDE1AP54750 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PDE1AP54750 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDE1AP54750 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.62■■□□□ 1.05
PDE1AP54750 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.62■■□□□ 1.05
PDE1AP54750 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
PDE1AP54750 AC019129.2-201ENST00000609837 1235 ntBASIC21.62■■□□□ 1.05
PDE1AP54750 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDE1AP54750 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.62■■□□□ 1.05
PDE1AP54750 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
PDE1AP54750 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDE1AP54750 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PDE1AP54750 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDE1AP54750 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PDE1AP54750 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PDE1AP54750 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
PDE1AP54750 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC21.62■■□□□ 1.05
PDE1AP54750 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDE1AP54750 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE1AP54750 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.61■■□□□ 1.05
PDE1AP54750 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PDE1AP54750 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE1AP54750 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE1AP54750 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE1AP54750 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE1AP54750 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE1AP54750 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.61■■□□□ 1.05
PDE1AP54750 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.61■■□□□ 1.05
PDE1AP54750 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.61■■□□□ 1.05
PDE1AP54750 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.61■■□□□ 1.05
PDE1AP54750 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.61■■□□□ 1.05
PDE1AP54750 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.61■■□□□ 1.05
PDE1AP54750 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.61■■□□□ 1.05
PDE1AP54750 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.61■■□□□ 1.05
PDE1AP54750 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE1AP54750 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDE1AP54750 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE1AP54750 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE1AP54750 LTB4R2-202ENST00000528054 3092 ntBASIC21.61■■□□□ 1.05
PDE1AP54750 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21.61■■□□□ 1.05
PDE1AP54750 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDE1AP54750 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
PDE1AP54750 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
PDE1AP54750 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDE1AP54750 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDE1AP54750 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDE1AP54750 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDE1AP54750 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PDE1AP54750 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PDE1AP54750 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDE1AP54750 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.6■■□□□ 1.05
PDE1AP54750 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDE1AP54750 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.6■■□□□ 1.05
PDE1AP54750 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDE1AP54750 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDE1AP54750 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.6■■□□□ 1.05
PDE1AP54750 AC002558.1-201ENST00000488906 803 ntBASIC21.6■■□□□ 1.05
PDE1AP54750 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.6■■□□□ 1.05
PDE1AP54750 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.6■■□□□ 1.05
PDE1AP54750 AC091076.1-201ENST00000610741 619 ntBASIC21.6■■□□□ 1.05
PDE1AP54750 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.6■■□□□ 1.05
PDE1AP54750 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDE1AP54750 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
PDE1AP54750 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDE1AP54750 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.6■■□□□ 1.05
PDE1AP54750 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms