Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACLYP53396 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACLYP53396 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ACLYP53396 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ACLYP53396 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACLYP53396 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACLYP53396 AC073592.3-201ENST00000625118 1834 ntBASIC19.42■□□□□ 0.7
ACLYP53396 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.42■□□□□ 0.7
ACLYP53396 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.42■□□□□ 0.7
ACLYP53396 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACLYP53396 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACLYP53396 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACLYP53396 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.42■□□□□ 0.7
ACLYP53396 AC004461.1-201ENST00000412461 403 ntBASIC19.42■□□□□ 0.7
ACLYP53396 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ACLYP53396 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.42■□□□□ 0.7
ACLYP53396 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.42■□□□□ 0.7
ACLYP53396 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.42■□□□□ 0.7
ACLYP53396 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.42■□□□□ 0.7
ACLYP53396 AL096865.1-201ENST00000606796 927 ntBASIC19.42■□□□□ 0.7
ACLYP53396 AC116407.2-201ENST00000613639 860 ntBASIC19.42■□□□□ 0.7
ACLYP53396 AC093512.1-201ENST00000617969 520 ntBASIC19.42■□□□□ 0.7
ACLYP53396 AC105339.1-204ENST00000636249 355 ntBASIC19.42■□□□□ 0.7
ACLYP53396 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACLYP53396 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACLYP53396 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACLYP53396 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACLYP53396 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ACLYP53396 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ACLYP53396 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACLYP53396 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACLYP53396 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACLYP53396 BX276092.7-203ENST00000637198 1536 ntBASIC19.41■□□□□ 0.7
ACLYP53396 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.41■□□□□ 0.7
ACLYP53396 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACLYP53396 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACLYP53396 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACLYP53396 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACLYP53396 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACLYP53396 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.41■□□□□ 0.7
ACLYP53396 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ACLYP53396 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
ACLYP53396 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACLYP53396 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.41■□□□□ 0.7
ACLYP53396 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ACLYP53396 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ACLYP53396 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.41■□□□□ 0.7
ACLYP53396 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ACLYP53396 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.41■□□□□ 0.7
ACLYP53396 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACLYP53396 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.41■□□□□ 0.7
ACLYP53396 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.41■□□□□ 0.7
ACLYP53396 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.41■□□□□ 0.7
ACLYP53396 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ACLYP53396 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ACLYP53396 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ACLYP53396 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.41■□□□□ 0.7
ACLYP53396 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.41■□□□□ 0.7
ACLYP53396 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACLYP53396 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ACLYP53396 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ACLYP53396 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ACLYP53396 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACLYP53396 AL096828.2-201ENST00000567259 1965 ntBASIC19.41■□□□□ 0.7
ACLYP53396 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
ACLYP53396 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ACLYP53396 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ACLYP53396 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ACLYP53396 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.4■□□□□ 0.7
ACLYP53396 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ACLYP53396 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACLYP53396 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.4■□□□□ 0.7
ACLYP53396 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ACLYP53396 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ACLYP53396 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACLYP53396 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACLYP53396 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.4■□□□□ 0.7
ACLYP53396 BCRP1-201ENST00000444246 691 ntBASIC19.4■□□□□ 0.7
ACLYP53396 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.4■□□□□ 0.7
ACLYP53396 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ACLYP53396 CXCL1P1-201ENST00000502804 216 ntBASIC19.4■□□□□ 0.7
ACLYP53396 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.4■□□□□ 0.7
ACLYP53396 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.4■□□□□ 0.7
ACLYP53396 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.4■□□□□ 0.7
ACLYP53396 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.4■□□□□ 0.7
ACLYP53396 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.4■□□□□ 0.7
ACLYP53396 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.4■□□□□ 0.7
ACLYP53396 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.4■□□□□ 0.7
ACLYP53396 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.4■□□□□ 0.7
ACLYP53396 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ACLYP53396 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.4■□□□□ 0.7
ACLYP53396 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ACLYP53396 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACLYP53396 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ACLYP53396 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ACLYP53396 PI4KAP1-204ENST00000612579 1703 ntBASIC19.39■□□□□ 0.7
ACLYP53396 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ACLYP53396 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
ACLYP53396 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ACLYP53396 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms