Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMGA2P52926 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGA2P52926 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HMGA2P52926 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HMGA2P52926 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGA2P52926 LINC02012-201ENST00000608206 1725 ntBASIC16.17■□□□□ 0.18
HMGA2P52926 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGA2P52926 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGA2P52926 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGA2P52926 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMGA2P52926 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HMGA2P52926 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGA2P52926 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HMGA2P52926 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMGA2P52926 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGA2P52926 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGA2P52926 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.17■□□□□ 0.18
HMGA2P52926 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGA2P52926 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGA2P52926 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGA2P52926 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.17■□□□□ 0.18
HMGA2P52926 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMGA2P52926 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGA2P52926 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGA2P52926 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGA2P52926 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.17■□□□□ 0.18
HMGA2P52926 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.17■□□□□ 0.18
HMGA2P52926 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGA2P52926 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.17■□□□□ 0.18
HMGA2P52926 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.17■□□□□ 0.18
HMGA2P52926 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
HMGA2P52926 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGA2P52926 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGA2P52926 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMGA2P52926 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGA2P52926 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGA2P52926 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGA2P52926 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGA2P52926 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMGA2P52926 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGA2P52926 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGA2P52926 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGA2P52926 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGA2P52926 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGA2P52926 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
HMGA2P52926 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGA2P52926 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGA2P52926 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
HMGA2P52926 PCDHA14-201ENST00000506751 2298 ntBASIC16.16■□□□□ 0.18
HMGA2P52926 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.16■□□□□ 0.18
HMGA2P52926 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HMGA2P52926 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGA2P52926 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGA2P52926 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGA2P52926 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.16■□□□□ 0.18
HMGA2P52926 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.16■□□□□ 0.18
HMGA2P52926 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
HMGA2P52926 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGA2P52926 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
HMGA2P52926 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGA2P52926 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGA2P52926 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.16■□□□□ 0.18
HMGA2P52926 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGA2P52926 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.16■□□□□ 0.18
HMGA2P52926 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.16■□□□□ 0.18
HMGA2P52926 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGA2P52926 ECEL1P3-201ENST00000427961 737 ntBASIC16.16■□□□□ 0.18
HMGA2P52926 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.16■□□□□ 0.18
HMGA2P52926 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.16■□□□□ 0.18
HMGA2P52926 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.16■□□□□ 0.18
HMGA2P52926 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.16■□□□□ 0.18
HMGA2P52926 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
HMGA2P52926 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.16■□□□□ 0.18
HMGA2P52926 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.16■□□□□ 0.18
HMGA2P52926 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGA2P52926 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGA2P52926 AC046185.3-201ENST00000623228 1824 ntBASIC16.16■□□□□ 0.18
HMGA2P52926 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGA2P52926 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.16■□□□□ 0.18
HMGA2P52926 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HMGA2P52926 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGA2P52926 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGA2P52926 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGA2P52926 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGA2P52926 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGA2P52926 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGA2P52926 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGA2P52926 FLJ38576-201ENST00000623820 2459 ntBASIC16.16■□□□□ 0.18
HMGA2P52926 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGA2P52926 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGA2P52926 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGA2P52926 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGA2P52926 PCDHB19P-201ENST00000570871 2371 ntBASIC16.15■□□□□ 0.18
HMGA2P52926 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.15■□□□□ 0.18
HMGA2P52926 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HMGA2P52926 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HMGA2P52926 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGA2P52926 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGA2P52926 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGA2P52926 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms