Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.04□□□□□ -0.16
CDC34P49427 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC34P49427 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC34P49427 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDC34P49427 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDC34P49427 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC34P49427 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.04□□□□□ -0.16
CDC34P49427 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC34P49427 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.04□□□□□ -0.16
CDC34P49427 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.04□□□□□ -0.16
CDC34P49427 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC34P49427 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC34P49427 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDC34P49427 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC34P49427 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.03□□□□□ -0.16
CDC34P49427 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC34P49427 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC34P49427 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CDC34P49427 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC34P49427 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CDC34P49427 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDC34P49427 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CDC34P49427 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.03□□□□□ -0.16
CDC34P49427 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.03□□□□□ -0.16
CDC34P49427 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC34P49427 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC34P49427 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDC34P49427 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDC34P49427 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CDC34P49427 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.03□□□□□ -0.16
CDC34P49427 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC34P49427 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC34P49427 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC34P49427 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.03□□□□□ -0.16
CDC34P49427 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.03□□□□□ -0.16
CDC34P49427 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.03□□□□□ -0.16
CDC34P49427 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.03□□□□□ -0.16
CDC34P49427 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDC34P49427 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC34P49427 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CDC34P49427 MTDHP1-201ENST00000605323 784 ntBASIC14.03□□□□□ -0.16
CDC34P49427 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CDC34P49427 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CDC34P49427 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.03□□□□□ -0.16
CDC34P49427 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.03□□□□□ -0.16
CDC34P49427 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC34P49427 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.03□□□□□ -0.16
CDC34P49427 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CDC34P49427 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDC34P49427 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.03□□□□□ -0.16
CDC34P49427 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDC34P49427 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CDC34P49427 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC34P49427 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CDC34P49427 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDC34P49427 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CDC34P49427 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDC34P49427 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC34P49427 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDC34P49427 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CDC34P49427 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CDC34P49427 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC34P49427 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC34P49427 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.03□□□□□ -0.16
CDC34P49427 AC063926.3-201ENST00000624734 5658 ntBASIC14.03□□□□□ -0.16
CDC34P49427 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDC34P49427 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDC34P49427 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CDC34P49427 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.16
CDC34P49427 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.02□□□□□ -0.16
CDC34P49427 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
CDC34P49427 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.02□□□□□ -0.16
CDC34P49427 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDC34P49427 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDC34P49427 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.02□□□□□ -0.17
CDC34P49427 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC34P49427 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC34P49427 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
CDC34P49427 KRASP1-201ENST00000407852 552 ntBASIC14.02□□□□□ -0.17
CDC34P49427 AC239809.2-201ENST00000415381 517 ntBASIC14.02□□□□□ -0.17
CDC34P49427 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC14.02□□□□□ -0.17
CDC34P49427 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDC34P49427 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.02□□□□□ -0.17
CDC34P49427 AC009065.1-201ENST00000564055 1225 ntBASIC14.02□□□□□ -0.17
CDC34P49427 AL138781.1-201ENST00000566567 1274 ntBASIC14.02□□□□□ -0.17
CDC34P49427 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.02□□□□□ -0.17
CDC34P49427 MIR3180-5-201ENST00000583743 153 ntBASIC14.02□□□□□ -0.17
CDC34P49427 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.02□□□□□ -0.17
CDC34P49427 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC34P49427 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
CDC34P49427 CICP6-201ENST00000457191 2729 ntBASIC14.02□□□□□ -0.17
CDC34P49427 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC34P49427 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDC34P49427 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CDC34P49427 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC34P49427 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.02□□□□□ -0.17
CDC34P49427 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CDC34P49427 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC34P49427 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDC34P49427 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms