Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CEACAM3P40198 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.48□□□□□ -0.09
CEACAM3P40198 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CEACAM3P40198 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.48□□□□□ -0.09
CEACAM3P40198 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
CEACAM3P40198 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.48□□□□□ -0.09
CEACAM3P40198 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CEACAM3P40198 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CEACAM3P40198 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CEACAM3P40198 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
CEACAM3P40198 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CEACAM3P40198 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
CEACAM3P40198 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CEACAM3P40198 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CEACAM3P40198 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.48□□□□□ -0.09
CEACAM3P40198 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CEACAM3P40198 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CEACAM3P40198 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CEACAM3P40198 DDX43P3-201ENST00000441064 443 ntBASIC14.48□□□□□ -0.09
CEACAM3P40198 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.48□□□□□ -0.09
CEACAM3P40198 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CEACAM3P40198 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.48□□□□□ -0.09
CEACAM3P40198 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.48□□□□□ -0.09
CEACAM3P40198 AP002414.4-201ENST00000589764 1148 ntBASIC14.48□□□□□ -0.09
CEACAM3P40198 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.48□□□□□ -0.09
CEACAM3P40198 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.48□□□□□ -0.09
CEACAM3P40198 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CEACAM3P40198 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.48□□□□□ -0.09
CEACAM3P40198 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CEACAM3P40198 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CEACAM3P40198 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
CEACAM3P40198 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.48□□□□□ -0.09
CEACAM3P40198 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CEACAM3P40198 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CEACAM3P40198 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CEACAM3P40198 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.48□□□□□ -0.09
CEACAM3P40198 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CEACAM3P40198 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CEACAM3P40198 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CEACAM3P40198 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CEACAM3P40198 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CEACAM3P40198 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.48□□□□□ -0.09
CEACAM3P40198 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CEACAM3P40198 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CEACAM3P40198 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.48□□□□□ -0.09
CEACAM3P40198 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.47□□□□□ -0.09
CEACAM3P40198 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CEACAM3P40198 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.47□□□□□ -0.09
CEACAM3P40198 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CEACAM3P40198 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CEACAM3P40198 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.47□□□□□ -0.09
CEACAM3P40198 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.47□□□□□ -0.09
CEACAM3P40198 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.47□□□□□ -0.09
CEACAM3P40198 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.47□□□□□ -0.09
CEACAM3P40198 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CEACAM3P40198 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CEACAM3P40198 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CEACAM3P40198 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CEACAM3P40198 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CEACAM3P40198 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CEACAM3P40198 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.47□□□□□ -0.09
CEACAM3P40198 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.47□□□□□ -0.09
CEACAM3P40198 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.47□□□□□ -0.09
CEACAM3P40198 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CEACAM3P40198 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CEACAM3P40198 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CEACAM3P40198 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.47□□□□□ -0.09
CEACAM3P40198 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.47□□□□□ -0.09
CEACAM3P40198 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.47□□□□□ -0.09
CEACAM3P40198 LINC00265-3P-201ENST00000447588 903 ntBASIC14.47□□□□□ -0.09
CEACAM3P40198 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.47□□□□□ -0.09
CEACAM3P40198 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.47□□□□□ -0.09
CEACAM3P40198 AC104819.1-201ENST00000504587 486 ntBASIC14.47□□□□□ -0.09
CEACAM3P40198 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CEACAM3P40198 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.47□□□□□ -0.09
CEACAM3P40198 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.47□□□□□ -0.09
CEACAM3P40198 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CEACAM3P40198 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.47□□□□□ -0.09
CEACAM3P40198 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CEACAM3P40198 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CEACAM3P40198 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CEACAM3P40198 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CEACAM3P40198 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CEACAM3P40198 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CEACAM3P40198 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CEACAM3P40198 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CEACAM3P40198 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CEACAM3P40198 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CEACAM3P40198 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.47□□□□□ -0.09
CEACAM3P40198 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CEACAM3P40198 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CEACAM3P40198 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CEACAM3P40198 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CEACAM3P40198 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CEACAM3P40198 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CEACAM3P40198 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CEACAM3P40198 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CEACAM3P40198 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.46□□□□□ -0.09
CEACAM3P40198 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.46□□□□□ -0.09
CEACAM3P40198 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms