Protein–RNA interactions for Protein: P35663

CYLC1, Cylicin-1, humanhuman

Predicted RBP Predictions only

Length 651 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYLC1P35663 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CYLC1P35663 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CYLC1P35663 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CYLC1P35663 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CYLC1P35663 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CYLC1P35663 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CYLC1P35663 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CYLC1P35663 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.12■□□□□ 0.65
CYLC1P35663 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CYLC1P35663 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYLC1P35663 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CYLC1P35663 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.12■□□□□ 0.65
CYLC1P35663 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYLC1P35663 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYLC1P35663 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CYLC1P35663 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYLC1P35663 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.12■□□□□ 0.65
CYLC1P35663 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYLC1P35663 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYLC1P35663 MIR1238-201ENST00000408483 83 ntBASIC19.12■□□□□ 0.65
CYLC1P35663 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.12■□□□□ 0.65
CYLC1P35663 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.12■□□□□ 0.65
CYLC1P35663 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CYLC1P35663 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CYLC1P35663 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYLC1P35663 MIR4785-201ENST00000585005 73 ntBASIC19.12■□□□□ 0.65
CYLC1P35663 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.12■□□□□ 0.65
CYLC1P35663 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CYLC1P35663 Z99916.2-201ENST00000604037 246 ntBASIC19.12■□□□□ 0.65
CYLC1P35663 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.12■□□□□ 0.65
CYLC1P35663 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYLC1P35663 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.12■□□□□ 0.65
CYLC1P35663 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYLC1P35663 AL118508.1-201ENST00000613502 2345 ntBASIC19.12■□□□□ 0.65
CYLC1P35663 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CYLC1P35663 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.12■□□□□ 0.65
CYLC1P35663 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.12■□□□□ 0.65
CYLC1P35663 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYLC1P35663 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.11■□□□□ 0.65
CYLC1P35663 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLC1P35663 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLC1P35663 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CYLC1P35663 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.11■□□□□ 0.65
CYLC1P35663 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.11■□□□□ 0.65
CYLC1P35663 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CYLC1P35663 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CYLC1P35663 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.11■□□□□ 0.65
CYLC1P35663 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLC1P35663 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLC1P35663 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLC1P35663 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CYLC1P35663 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLC1P35663 AC016396.2-201ENST00000562575 1417 ntBASIC19.11■□□□□ 0.65
CYLC1P35663 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLC1P35663 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLC1P35663 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLC1P35663 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLC1P35663 EGLN1P1-201ENST00000531623 762 ntBASIC19.11■□□□□ 0.65
CYLC1P35663 AL512604.3-201ENST00000569583 964 ntBASIC19.11■□□□□ 0.65
CYLC1P35663 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.11■□□□□ 0.65
CYLC1P35663 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.11■□□□□ 0.65
CYLC1P35663 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLC1P35663 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CYLC1P35663 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.11■□□□□ 0.65
CYLC1P35663 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CYLC1P35663 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLC1P35663 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLC1P35663 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.11■□□□□ 0.65
CYLC1P35663 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
CYLC1P35663 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CYLC1P35663 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.1■□□□□ 0.65
CYLC1P35663 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYLC1P35663 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
CYLC1P35663 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYLC1P35663 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CYLC1P35663 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYLC1P35663 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYLC1P35663 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CYLC1P35663 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYLC1P35663 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.1■□□□□ 0.65
CYLC1P35663 KRT18P65-201ENST00000439811 1286 ntBASIC19.1■□□□□ 0.65
CYLC1P35663 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.1■□□□□ 0.65
CYLC1P35663 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.1■□□□□ 0.65
CYLC1P35663 AC128688.1-201ENST00000487626 519 ntBASIC19.1■□□□□ 0.65
CYLC1P35663 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.1■□□□□ 0.65
CYLC1P35663 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.1■□□□□ 0.65
CYLC1P35663 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.1■□□□□ 0.65
CYLC1P35663 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.1■□□□□ 0.65
CYLC1P35663 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.1■□□□□ 0.65
CYLC1P35663 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYLC1P35663 TNRC18P3-201ENST00000441896 2691 ntBASIC19.1■□□□□ 0.65
CYLC1P35663 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.1■□□□□ 0.65
CYLC1P35663 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CYLC1P35663 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYLC1P35663 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYLC1P35663 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.1■□□□□ 0.65
CYLC1P35663 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CYLC1P35663 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.1■□□□□ 0.65
CYLC1P35663 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYLC1P35663 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms