Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.21■□□□□ 0.83
CLCN1P35523 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN1P35523 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN1P35523 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN1P35523 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN1P35523 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN1P35523 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
CLCN1P35523 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN1P35523 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN1P35523 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CLCN1P35523 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN1P35523 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN1P35523 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CLCN1P35523 AL355312.1-201ENST00000407115 2176 ntBASIC20.2■□□□□ 0.82
CLCN1P35523 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN1P35523 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN1P35523 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CLCN1P35523 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CLCN1P35523 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.2■□□□□ 0.82
CLCN1P35523 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.2■□□□□ 0.82
CLCN1P35523 NUDT16P1-203ENST00000513809 620 ntBASIC20.2■□□□□ 0.82
CLCN1P35523 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.2■□□□□ 0.82
CLCN1P35523 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.2■□□□□ 0.82
CLCN1P35523 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN1P35523 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
CLCN1P35523 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN1P35523 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN1P35523 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN1P35523 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN1P35523 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CLCN1P35523 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CLCN1P35523 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CLCN1P35523 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.2■□□□□ 0.82
CLCN1P35523 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN1P35523 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN1P35523 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.2■□□□□ 0.82
CLCN1P35523 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN1P35523 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN1P35523 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN1P35523 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
CLCN1P35523 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN1P35523 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN1P35523 KRT8P3-201ENST00000519669 1449 ntBASIC20.19■□□□□ 0.82
CLCN1P35523 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN1P35523 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC20.19■□□□□ 0.82
CLCN1P35523 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
CLCN1P35523 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CLCN1P35523 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN1P35523 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.19■□□□□ 0.82
CLCN1P35523 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.19■□□□□ 0.82
CLCN1P35523 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.19■□□□□ 0.82
CLCN1P35523 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.19■□□□□ 0.82
CLCN1P35523 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.19■□□□□ 0.82
CLCN1P35523 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.19■□□□□ 0.82
CLCN1P35523 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN1P35523 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.19■□□□□ 0.82
CLCN1P35523 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC20.19■□□□□ 0.82
CLCN1P35523 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN1P35523 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN1P35523 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN1P35523 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.18■□□□□ 0.82
CLCN1P35523 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.18■□□□□ 0.82
CLCN1P35523 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CLCN1P35523 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN1P35523 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN1P35523 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN1P35523 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.18■□□□□ 0.82
CLCN1P35523 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN1P35523 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN1P35523 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN1P35523 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.18■□□□□ 0.82
CLCN1P35523 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.18■□□□□ 0.82
CLCN1P35523 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN1P35523 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC20.18■□□□□ 0.82
CLCN1P35523 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CLCN1P35523 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN1P35523 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN1P35523 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.18■□□□□ 0.82
CLCN1P35523 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN1P35523 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN1P35523 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CLCN1P35523 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.18■□□□□ 0.82
CLCN1P35523 AC112777.1-201ENST00000540175 1423 ntBASIC20.18■□□□□ 0.82
CLCN1P35523 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.17■□□□□ 0.82
CLCN1P35523 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CLCN1P35523 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
CLCN1P35523 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
CLCN1P35523 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CLCN1P35523 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN1P35523 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN1P35523 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN1P35523 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CLCN1P35523 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC20.17■□□□□ 0.82
CLCN1P35523 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC20.17■□□□□ 0.82
CLCN1P35523 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN1P35523 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CLCN1P35523 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN1P35523 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN1P35523 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.17■□□□□ 0.82
CLCN1P35523 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms