Protein–RNA interactions for Protein: P26358

DNMT1, DNA (cytosine-5)-methyltransferase 1, humanhuman

Known RBP Predictions only

Length 1,616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1P26358 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
DNMT1P26358 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
DNMT1P26358 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC26.32■■□□□ 1.8
DNMT1P26358 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
DNMT1P26358 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC26.32■■□□□ 1.8
DNMT1P26358 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
DNMT1P26358 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
DNMT1P26358 LINC00982-205ENST00000420957 435 ntBASIC26.32■■□□□ 1.8
DNMT1P26358 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
DNMT1P26358 SPCS2P1-201ENST00000561636 679 ntBASIC26.32■■□□□ 1.8
DNMT1P26358 COX5A-206ENST00000568783 571 ntTSL 3 BASIC26.32■■□□□ 1.8
DNMT1P26358 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC26.32■■□□□ 1.8
DNMT1P26358 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC26.32■■□□□ 1.8
DNMT1P26358 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
DNMT1P26358 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
DNMT1P26358 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DNMT1P26358 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC26.31■■□□□ 1.8
DNMT1P26358 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DNMT1P26358 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
DNMT1P26358 AMT-250ENST00000637682 1823 ntTSL 5 BASIC26.31■■□□□ 1.8
DNMT1P26358 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC26.31■■□□□ 1.8
DNMT1P26358 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
DNMT1P26358 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DNMT1P26358 CRYGEP-201ENST00000412192 528 ntBASIC26.31■■□□□ 1.8
DNMT1P26358 SLC4A1APP2-201ENST00000424054 1259 ntBASIC26.31■■□□□ 1.8
DNMT1P26358 OR7E47P-204ENST00000575924 449 ntBASIC26.31■■□□□ 1.8
DNMT1P26358 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC26.31■■□□□ 1.8
DNMT1P26358 AL513190.1-201ENST00000621254 727 ntBASIC26.31■■□□□ 1.8
DNMT1P26358 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC26.31■■□□□ 1.8
DNMT1P26358 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC26.31■■□□□ 1.8
DNMT1P26358 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DNMT1P26358 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
DNMT1P26358 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
DNMT1P26358 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC26.3■■□□□ 1.8
DNMT1P26358 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
DNMT1P26358 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
DNMT1P26358 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC26.3■■□□□ 1.8
DNMT1P26358 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
DNMT1P26358 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
DNMT1P26358 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
DNMT1P26358 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC26.3■■□□□ 1.8
DNMT1P26358 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC26.3■■□□□ 1.8
DNMT1P26358 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
DNMT1P26358 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC26.3■■□□□ 1.8
DNMT1P26358 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
DNMT1P26358 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
DNMT1P26358 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC26.3■■□□□ 1.8
DNMT1P26358 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC26.3■■□□□ 1.8
DNMT1P26358 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
DNMT1P26358 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
DNMT1P26358 AC097637.2-201ENST00000624096 1997 ntBASIC26.3■■□□□ 1.8
DNMT1P26358 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
DNMT1P26358 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC26.3■■□□□ 1.8
DNMT1P26358 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC26.3■■□□□ 1.8
DNMT1P26358 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DNMT1P26358 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC26.29■■□□□ 1.8
DNMT1P26358 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC26.29■■□□□ 1.8
DNMT1P26358 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC26.29■■□□□ 1.8
DNMT1P26358 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC26.29■■□□□ 1.8
DNMT1P26358 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC26.29■■□□□ 1.8
DNMT1P26358 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
DNMT1P26358 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC26.29■■□□□ 1.8
DNMT1P26358 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC26.29■■□□□ 1.8
DNMT1P26358 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
DNMT1P26358 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
DNMT1P26358 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
DNMT1P26358 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DNMT1P26358 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
DNMT1P26358 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
DNMT1P26358 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
DNMT1P26358 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
DNMT1P26358 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
DNMT1P26358 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC26.28■■□□□ 1.8
DNMT1P26358 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
DNMT1P26358 TK1-204ENST00000590430 683 ntTSL 3 BASIC26.28■■□□□ 1.8
DNMT1P26358 AC092865.6-201ENST00000642101 219 ntBASIC26.28■■□□□ 1.8
DNMT1P26358 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC26.28■■□□□ 1.8
DNMT1P26358 AL354751.1-201ENST00000412768 1863 ntBASIC26.28■■□□□ 1.8
DNMT1P26358 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
DNMT1P26358 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
DNMT1P26358 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC26.28■■□□□ 1.8
DNMT1P26358 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC26.28■■□□□ 1.8
DNMT1P26358 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC26.28■■□□□ 1.8
DNMT1P26358 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
DNMT1P26358 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
DNMT1P26358 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
DNMT1P26358 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC26.28■■□□□ 1.8
DNMT1P26358 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
DNMT1P26358 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
DNMT1P26358 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC26.28■■□□□ 1.8
DNMT1P26358 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC26.28■■□□□ 1.8
DNMT1P26358 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
DNMT1P26358 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
DNMT1P26358 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
DNMT1P26358 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
DNMT1P26358 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
DNMT1P26358 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC26.27■■□□□ 1.8
DNMT1P26358 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC26.27■■□□□ 1.8
DNMT1P26358 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC26.27■■□□□ 1.8
DNMT1P26358 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms