Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL8A2P25067 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
COL8A2P25067 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL8A2P25067 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL8A2P25067 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL8A2P25067 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL8A2P25067 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
COL8A2P25067 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.98□□□□□ -0.01
COL8A2P25067 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL8A2P25067 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL8A2P25067 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL8A2P25067 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.97□□□□□ -0.01
COL8A2P25067 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL8A2P25067 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL8A2P25067 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
COL8A2P25067 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL8A2P25067 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
COL8A2P25067 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL8A2P25067 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.97□□□□□ -0.01
COL8A2P25067 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL8A2P25067 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL8A2P25067 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL8A2P25067 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.97□□□□□ -0.01
COL8A2P25067 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
COL8A2P25067 RBM17P3-201ENST00000417687 1192 ntBASIC14.97□□□□□ -0.01
COL8A2P25067 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL8A2P25067 AP000347.1-202ENST00000435868 847 ntBASIC14.97□□□□□ -0.01
COL8A2P25067 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.97□□□□□ -0.01
COL8A2P25067 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.97□□□□□ -0.01
COL8A2P25067 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL8A2P25067 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.97□□□□□ -0.01
COL8A2P25067 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.97□□□□□ -0.01
COL8A2P25067 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.97□□□□□ -0.01
COL8A2P25067 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.97□□□□□ -0.01
COL8A2P25067 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.97□□□□□ -0.01
COL8A2P25067 RNPS1P1-201ENST00000507437 918 ntBASIC14.97□□□□□ -0.01
COL8A2P25067 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.97□□□□□ -0.01
COL8A2P25067 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.97□□□□□ -0.01
COL8A2P25067 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.97□□□□□ -0.01
COL8A2P25067 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.97□□□□□ -0.01
COL8A2P25067 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL8A2P25067 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.97□□□□□ -0.01
COL8A2P25067 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL8A2P25067 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.97□□□□□ -0.01
COL8A2P25067 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
COL8A2P25067 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL8A2P25067 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL8A2P25067 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL8A2P25067 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
COL8A2P25067 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL8A2P25067 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL8A2P25067 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL8A2P25067 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL8A2P25067 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL8A2P25067 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.97□□□□□ -0.01
COL8A2P25067 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL8A2P25067 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL8A2P25067 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
COL8A2P25067 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.96□□□□□ -0.01
COL8A2P25067 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL8A2P25067 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL8A2P25067 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL8A2P25067 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL8A2P25067 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.96□□□□□ -0.01
COL8A2P25067 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.96□□□□□ -0.01
COL8A2P25067 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.96□□□□□ -0.01
COL8A2P25067 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL8A2P25067 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL8A2P25067 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL8A2P25067 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL8A2P25067 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.96□□□□□ -0.01
COL8A2P25067 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL8A2P25067 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL8A2P25067 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.96□□□□□ -0.01
COL8A2P25067 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.96□□□□□ -0.01
COL8A2P25067 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL8A2P25067 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL8A2P25067 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL8A2P25067 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.96□□□□□ -0.01
COL8A2P25067 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.96□□□□□ -0.01
COL8A2P25067 AF186996.4-201ENST00000467186 377 ntBASIC14.96□□□□□ -0.01
COL8A2P25067 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.96□□□□□ -0.01
COL8A2P25067 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.96□□□□□ -0.01
COL8A2P25067 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.96□□□□□ -0.01
COL8A2P25067 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.96□□□□□ -0.01
COL8A2P25067 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
COL8A2P25067 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL8A2P25067 AL773604.1-201ENST00000617417 272 ntBASIC14.96□□□□□ -0.01
COL8A2P25067 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL8A2P25067 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.96□□□□□ -0.01
COL8A2P25067 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
COL8A2P25067 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
COL8A2P25067 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
COL8A2P25067 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
COL8A2P25067 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.96□□□□□ -0.02
COL8A2P25067 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
COL8A2P25067 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL8A2P25067 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL8A2P25067 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL8A2P25067 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms