Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP8P22894 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
MMP8P22894 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
MMP8P22894 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP8P22894 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.63■□□□□ 0.57
MMP8P22894 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP8P22894 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP8P22894 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.63■□□□□ 0.57
MMP8P22894 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP8P22894 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MMP8P22894 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
MMP8P22894 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MMP8P22894 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MMP8P22894 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
MMP8P22894 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
MMP8P22894 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP8P22894 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.63■□□□□ 0.57
MMP8P22894 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP8P22894 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
MMP8P22894 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP8P22894 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.63■□□□□ 0.57
MMP8P22894 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
MMP8P22894 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
MMP8P22894 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.63■□□□□ 0.57
MMP8P22894 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
MMP8P22894 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.63■□□□□ 0.57
MMP8P22894 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP8P22894 KRT18P1-202ENST00000452408 1331 ntBASIC18.63■□□□□ 0.57
MMP8P22894 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP8P22894 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP8P22894 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP8P22894 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MMP8P22894 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP8P22894 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.63■□□□□ 0.57
MMP8P22894 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
MMP8P22894 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP8P22894 LYSMD4-203ENST00000378904 2122 ntBASIC18.62■□□□□ 0.57
MMP8P22894 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP8P22894 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
MMP8P22894 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP8P22894 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.62■□□□□ 0.57
MMP8P22894 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
MMP8P22894 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP8P22894 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP8P22894 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP8P22894 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP8P22894 TPSP2-201ENST00000561760 610 ntBASIC18.62■□□□□ 0.57
MMP8P22894 AC019129.2-201ENST00000609837 1235 ntBASIC18.62■□□□□ 0.57
MMP8P22894 AC010331.1-201ENST00000611423 582 ntBASIC18.62■□□□□ 0.57
MMP8P22894 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MMP8P22894 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MMP8P22894 AC233702.3-201ENST00000578656 1387 ntBASIC18.62■□□□□ 0.57
MMP8P22894 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.62■□□□□ 0.57
MMP8P22894 AL023806.1-201ENST00000603994 1649 ntBASIC18.62■□□□□ 0.57
MMP8P22894 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
MMP8P22894 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
MMP8P22894 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.62■□□□□ 0.57
MMP8P22894 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
MMP8P22894 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP8P22894 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MMP8P22894 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
MMP8P22894 FZD10-202ENST00000539839 3282 ntBASIC18.62■□□□□ 0.57
MMP8P22894 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP8P22894 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.61■□□□□ 0.57
MMP8P22894 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP8P22894 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MMP8P22894 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MMP8P22894 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP8P22894 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.61■□□□□ 0.57
MMP8P22894 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP8P22894 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP8P22894 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.61■□□□□ 0.57
MMP8P22894 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MMP8P22894 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP8P22894 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
MMP8P22894 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.61■□□□□ 0.57
MMP8P22894 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MMP8P22894 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MMP8P22894 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP8P22894 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.61■□□□□ 0.57
MMP8P22894 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MMP8P22894 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.61■□□□□ 0.57
MMP8P22894 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.61■□□□□ 0.57
MMP8P22894 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.61■□□□□ 0.57
MMP8P22894 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MMP8P22894 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.61■□□□□ 0.57
MMP8P22894 VENTXP7-201ENST00000475503 772 ntBASIC18.61■□□□□ 0.57
MMP8P22894 AC122714.2-201ENST00000502787 707 ntBASIC18.61■□□□□ 0.57
MMP8P22894 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.61■□□□□ 0.57
MMP8P22894 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MMP8P22894 AP002414.4-201ENST00000589764 1148 ntBASIC18.61■□□□□ 0.57
MMP8P22894 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.61■□□□□ 0.57
MMP8P22894 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP8P22894 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP8P22894 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MMP8P22894 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP8P22894 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP8P22894 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.61■□□□□ 0.57
MMP8P22894 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP8P22894 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms