Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.43■□□□□ 0.38
BCKDHBP21953 TSEN15P1-201ENST00000423257 515 ntBASIC17.43■□□□□ 0.38
BCKDHBP21953 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.43■□□□□ 0.38
BCKDHBP21953 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.43■□□□□ 0.38
BCKDHBP21953 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
BCKDHBP21953 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
BCKDHBP21953 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BCKDHBP21953 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
BCKDHBP21953 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
BCKDHBP21953 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BCKDHBP21953 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BCKDHBP21953 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
BCKDHBP21953 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BCKDHBP21953 AC018445.3-201ENST00000624177 1945 ntBASIC17.43■□□□□ 0.38
BCKDHBP21953 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BCKDHBP21953 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BCKDHBP21953 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BCKDHBP21953 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BCKDHBP21953 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
BCKDHBP21953 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BCKDHBP21953 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BCKDHBP21953 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BCKDHBP21953 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BCKDHBP21953 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BCKDHBP21953 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
BCKDHBP21953 AC025580.3-201ENST00000617932 1424 ntBASIC17.42■□□□□ 0.38
BCKDHBP21953 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
BCKDHBP21953 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.42■□□□□ 0.38
BCKDHBP21953 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BCKDHBP21953 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
BCKDHBP21953 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.42■□□□□ 0.38
BCKDHBP21953 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BCKDHBP21953 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BCKDHBP21953 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.42■□□□□ 0.38
BCKDHBP21953 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.42■□□□□ 0.38
BCKDHBP21953 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
BCKDHBP21953 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.42■□□□□ 0.38
BCKDHBP21953 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.42■□□□□ 0.38
BCKDHBP21953 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
BCKDHBP21953 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.42■□□□□ 0.38
BCKDHBP21953 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.42■□□□□ 0.38
BCKDHBP21953 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BCKDHBP21953 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BCKDHBP21953 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BCKDHBP21953 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
BCKDHBP21953 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BCKDHBP21953 AC097637.2-201ENST00000624096 1997 ntBASIC17.42■□□□□ 0.38
BCKDHBP21953 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.42■□□□□ 0.38
BCKDHBP21953 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
BCKDHBP21953 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
BCKDHBP21953 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.42■□□□□ 0.38
BCKDHBP21953 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BCKDHBP21953 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
BCKDHBP21953 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BCKDHBP21953 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
BCKDHBP21953 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
BCKDHBP21953 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BCKDHBP21953 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BCKDHBP21953 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BCKDHBP21953 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BCKDHBP21953 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.41■□□□□ 0.38
BCKDHBP21953 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BCKDHBP21953 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
BCKDHBP21953 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BCKDHBP21953 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BCKDHBP21953 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BCKDHBP21953 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BCKDHBP21953 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BCKDHBP21953 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BCKDHBP21953 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BCKDHBP21953 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.41■□□□□ 0.38
BCKDHBP21953 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.41■□□□□ 0.38
BCKDHBP21953 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.41■□□□□ 0.38
BCKDHBP21953 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.41■□□□□ 0.38
BCKDHBP21953 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.41■□□□□ 0.38
BCKDHBP21953 STK19B-204ENST00000512515 211 ntBASIC17.41■□□□□ 0.38
BCKDHBP21953 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
BCKDHBP21953 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
BCKDHBP21953 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
BCKDHBP21953 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.41■□□□□ 0.38
BCKDHBP21953 STK25P1-201ENST00000585406 838 ntBASIC17.41■□□□□ 0.38
BCKDHBP21953 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BCKDHBP21953 AC011467.4-201ENST00000594891 528 ntBASIC17.41■□□□□ 0.38
BCKDHBP21953 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
BCKDHBP21953 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.41■□□□□ 0.38
BCKDHBP21953 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BCKDHBP21953 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
BCKDHBP21953 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BCKDHBP21953 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
BCKDHBP21953 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BCKDHBP21953 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
BCKDHBP21953 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BCKDHBP21953 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BCKDHBP21953 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BCKDHBP21953 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.4■□□□□ 0.38
BCKDHBP21953 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.4■□□□□ 0.38
BCKDHBP21953 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BCKDHBP21953 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BCKDHBP21953 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
BCKDHBP21953 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms