Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 LSM12P1-201ENST00000411836 588 ntBASIC13.62□□□□□ -0.23
RAB4AP20338 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC13.62□□□□□ -0.23
RAB4AP20338 AL512625.2-201ENST00000417533 625 ntBASIC13.62□□□□□ -0.23
RAB4AP20338 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC13.62□□□□□ -0.23
RAB4AP20338 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC13.62□□□□□ -0.23
RAB4AP20338 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RAB4AP20338 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
RAB4AP20338 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.62□□□□□ -0.23
RAB4AP20338 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
RAB4AP20338 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.62□□□□□ -0.23
RAB4AP20338 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
RAB4AP20338 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.62□□□□□ -0.23
RAB4AP20338 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RAB4AP20338 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 AC124283.5-201ENST00000624661 1809 ntBASIC13.62□□□□□ -0.23
RAB4AP20338 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.61□□□□□ -0.23
RAB4AP20338 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 AC093677.2-201ENST00000600169 1863 ntBASIC13.61□□□□□ -0.23
RAB4AP20338 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 FLJ13224-201ENST00000313737 1514 ntBASIC13.61□□□□□ -0.23
RAB4AP20338 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC13.61□□□□□ -0.23
RAB4AP20338 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RAB4AP20338 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.61□□□□□ -0.23
RAB4AP20338 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RAB4AP20338 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.61□□□□□ -0.23
RAB4AP20338 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RAB4AP20338 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC13.61□□□□□ -0.23
RAB4AP20338 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.61□□□□□ -0.23
RAB4AP20338 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
RAB4AP20338 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.61□□□□□ -0.23
RAB4AP20338 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13.61□□□□□ -0.23
RAB4AP20338 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB4AP20338 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB4AP20338 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB4AP20338 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB4AP20338 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB4AP20338 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
RAB4AP20338 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB4AP20338 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
RAB4AP20338 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
RAB4AP20338 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RAB4AP20338 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB4AP20338 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB4AP20338 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB4AP20338 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB4AP20338 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RAB4AP20338 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
RAB4AP20338 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB4AP20338 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC13.6□□□□□ -0.23
RAB4AP20338 APTR-203ENST00000430801 583 ntTSL 5 BASIC13.6□□□□□ -0.23
RAB4AP20338 TUBB8P6-201ENST00000436895 1288 ntBASIC13.6□□□□□ -0.23
RAB4AP20338 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB4AP20338 RPS2P52-201ENST00000469610 820 ntBASIC13.6□□□□□ -0.23
RAB4AP20338 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB4AP20338 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.6□□□□□ -0.23
RAB4AP20338 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.6□□□□□ -0.23
RAB4AP20338 KRT18P16-201ENST00000510337 1294 ntBASIC13.6□□□□□ -0.23
RAB4AP20338 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC13.6□□□□□ -0.23
RAB4AP20338 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC13.6□□□□□ -0.23
RAB4AP20338 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB4AP20338 AC137761.2-201ENST00000561729 223 ntBASIC13.6□□□□□ -0.23
RAB4AP20338 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB4AP20338 AC145350.3-201ENST00000569033 163 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms