Protein–RNA interactions for Protein: P16452

EPB42, Erythrocyte membrane protein band 4.2, humanhuman

Predictions only

Length 691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42P16452 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
EPB42P16452 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EPB42P16452 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
EPB42P16452 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EPB42P16452 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EPB42P16452 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EPB42P16452 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
EPB42P16452 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EPB42P16452 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
EPB42P16452 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EPB42P16452 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EPB42P16452 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EPB42P16452 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EPB42P16452 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EPB42P16452 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
EPB42P16452 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EPB42P16452 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
EPB42P16452 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.3■□□□□ 0.36
EPB42P16452 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.3■□□□□ 0.36
EPB42P16452 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EPB42P16452 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EPB42P16452 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EPB42P16452 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
EPB42P16452 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
EPB42P16452 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
EPB42P16452 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EPB42P16452 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.3■□□□□ 0.36
EPB42P16452 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
EPB42P16452 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EPB42P16452 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.3■□□□□ 0.36
EPB42P16452 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.3■□□□□ 0.36
EPB42P16452 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.3■□□□□ 0.36
EPB42P16452 HYMAI.1-201ENST00000620949 238 ntBASIC17.3■□□□□ 0.36
EPB42P16452 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
EPB42P16452 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
EPB42P16452 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EPB42P16452 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
EPB42P16452 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
EPB42P16452 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
EPB42P16452 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
EPB42P16452 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EPB42P16452 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPB42P16452 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPB42P16452 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPB42P16452 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPB42P16452 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EPB42P16452 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.29■□□□□ 0.36
EPB42P16452 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPB42P16452 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
EPB42P16452 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPB42P16452 LINC00304-203ENST00000565008 1864 ntBASIC17.29■□□□□ 0.36
EPB42P16452 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.29■□□□□ 0.36
EPB42P16452 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPB42P16452 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
EPB42P16452 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.29■□□□□ 0.36
EPB42P16452 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPB42P16452 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EPB42P16452 AC063952.2-201ENST00000498792 1227 ntBASIC17.29■□□□□ 0.36
EPB42P16452 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.29■□□□□ 0.36
EPB42P16452 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPB42P16452 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.29■□□□□ 0.36
EPB42P16452 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.29■□□□□ 0.36
EPB42P16452 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.29■□□□□ 0.36
EPB42P16452 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.29■□□□□ 0.36
EPB42P16452 LINC01451-201ENST00000623792 534 ntBASIC17.29■□□□□ 0.36
EPB42P16452 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.29■□□□□ 0.36
EPB42P16452 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.29■□□□□ 0.36
EPB42P16452 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.29■□□□□ 0.36
EPB42P16452 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPB42P16452 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.29■□□□□ 0.36
EPB42P16452 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.29■□□□□ 0.36
EPB42P16452 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPB42P16452 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EPB42P16452 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
EPB42P16452 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPB42P16452 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
EPB42P16452 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPB42P16452 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPB42P16452 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.29■□□□□ 0.36
EPB42P16452 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EPB42P16452 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPB42P16452 HLA-J-201ENST00000462773 1622 ntBASIC17.29■□□□□ 0.36
EPB42P16452 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EPB42P16452 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.28■□□□□ 0.36
EPB42P16452 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPB42P16452 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EPB42P16452 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPB42P16452 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPB42P16452 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPB42P16452 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.28■□□□□ 0.36
EPB42P16452 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EPB42P16452 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPB42P16452 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPB42P16452 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPB42P16452 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.28■□□□□ 0.36
EPB42P16452 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.28■□□□□ 0.36
EPB42P16452 VENTXP5-201ENST00000523979 775 ntBASIC17.28■□□□□ 0.36
EPB42P16452 LINC01238-205ENST00000567549 1107 ntBASIC17.28■□□□□ 0.36
EPB42P16452 AC005332.3-201ENST00000589904 676 ntBASIC17.28■□□□□ 0.36
EPB42P16452 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms