Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A1P12107 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.99■□□□□ 0.79
COL11A1P12107 KRT18P55-202ENST00000578578 1546 ntBASIC19.99■□□□□ 0.79
COL11A1P12107 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A1P12107 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A1P12107 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
COL11A1P12107 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.99■□□□□ 0.79
COL11A1P12107 AC068137.2-201ENST00000605408 478 ntBASIC19.99■□□□□ 0.79
COL11A1P12107 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.99■□□□□ 0.79
COL11A1P12107 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.99■□□□□ 0.79
COL11A1P12107 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A1P12107 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
COL11A1P12107 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A1P12107 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
COL11A1P12107 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A1P12107 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.99■□□□□ 0.79
COL11A1P12107 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.99■□□□□ 0.79
COL11A1P12107 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.99■□□□□ 0.79
COL11A1P12107 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.98■□□□□ 0.79
COL11A1P12107 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL11A1P12107 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL11A1P12107 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.98■□□□□ 0.79
COL11A1P12107 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL11A1P12107 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.98■□□□□ 0.79
COL11A1P12107 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL11A1P12107 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.98■□□□□ 0.79
COL11A1P12107 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.98■□□□□ 0.79
COL11A1P12107 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.98■□□□□ 0.79
COL11A1P12107 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.98■□□□□ 0.79
COL11A1P12107 GGTLC5P-201ENST00000617623 998 ntBASIC19.98■□□□□ 0.79
COL11A1P12107 AC104581.1-202ENST00000635932 2618 ntBASIC19.98■□□□□ 0.79
COL11A1P12107 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.98■□□□□ 0.79
COL11A1P12107 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL11A1P12107 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.98■□□□□ 0.79
COL11A1P12107 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.98■□□□□ 0.79
COL11A1P12107 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL11A1P12107 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL11A1P12107 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.97■□□□□ 0.79
COL11A1P12107 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.97■□□□□ 0.79
COL11A1P12107 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.97■□□□□ 0.79
COL11A1P12107 MYCLP1-201ENST00000372451 1075 ntBASIC19.97■□□□□ 0.79
COL11A1P12107 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.97■□□□□ 0.79
COL11A1P12107 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.97■□□□□ 0.79
COL11A1P12107 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.97■□□□□ 0.79
COL11A1P12107 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.97■□□□□ 0.79
COL11A1P12107 AL596442.2-201ENST00000610240 980 ntBASIC19.97■□□□□ 0.79
COL11A1P12107 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.97■□□□□ 0.79
COL11A1P12107 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
COL11A1P12107 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL11A1P12107 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
COL11A1P12107 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
COL11A1P12107 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL11A1P12107 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL11A1P12107 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL11A1P12107 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL11A1P12107 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
COL11A1P12107 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.97■□□□□ 0.79
COL11A1P12107 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.97■□□□□ 0.79
COL11A1P12107 AP000344.2-201ENST00000512987 629 ntBASIC19.97■□□□□ 0.79
COL11A1P12107 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
COL11A1P12107 AC005829.1-201ENST00000570002 483 ntBASIC19.97■□□□□ 0.79
COL11A1P12107 OR7E47P-204ENST00000575924 449 ntBASIC19.97■□□□□ 0.79
COL11A1P12107 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.97■□□□□ 0.79
COL11A1P12107 C20orf181-201ENST00000623918 480 ntBASIC19.97■□□□□ 0.79
COL11A1P12107 AC004877.2-201ENST00000623941 599 ntBASIC19.97■□□□□ 0.79
COL11A1P12107 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.97■□□□□ 0.79
COL11A1P12107 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL11A1P12107 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL11A1P12107 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A1P12107 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A1P12107 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.96■□□□□ 0.79
COL11A1P12107 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.96■□□□□ 0.79
COL11A1P12107 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A1P12107 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.96■□□□□ 0.79
COL11A1P12107 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A1P12107 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
COL11A1P12107 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A1P12107 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A1P12107 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A1P12107 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.96■□□□□ 0.79
COL11A1P12107 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A1P12107 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.96■□□□□ 0.79
COL11A1P12107 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.96■□□□□ 0.79
COL11A1P12107 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.96■□□□□ 0.79
COL11A1P12107 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A1P12107 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A1P12107 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.96■□□□□ 0.79
COL11A1P12107 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A1P12107 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
COL11A1P12107 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
COL11A1P12107 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.96■□□□□ 0.79
COL11A1P12107 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A1P12107 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.96■□□□□ 0.79
COL11A1P12107 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A1P12107 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A1P12107 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
COL11A1P12107 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A1P12107 AC004408.2-201ENST00000623613 2777 ntBASIC19.96■□□□□ 0.79
COL11A1P12107 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL11A1P12107 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms