Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A2P08123 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A2P08123 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A2P08123 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
COL1A2P08123 GPALPP1-207ENST00000611650 899 ntBASIC19.36■□□□□ 0.69
COL1A2P08123 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.36■□□□□ 0.69
COL1A2P08123 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A2P08123 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.36■□□□□ 0.69
COL1A2P08123 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A2P08123 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A2P08123 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.36■□□□□ 0.69
COL1A2P08123 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.36■□□□□ 0.69
COL1A2P08123 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A2P08123 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
COL1A2P08123 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
COL1A2P08123 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A2P08123 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A2P08123 AC104581.1-202ENST00000635932 2618 ntBASIC19.36■□□□□ 0.69
COL1A2P08123 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A2P08123 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A2P08123 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A2P08123 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.36■□□□□ 0.69
COL1A2P08123 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A2P08123 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A2P08123 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A2P08123 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A2P08123 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.35■□□□□ 0.69
COL1A2P08123 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL1A2P08123 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL1A2P08123 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
COL1A2P08123 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL1A2P08123 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL1A2P08123 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.35■□□□□ 0.69
COL1A2P08123 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL1A2P08123 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.35■□□□□ 0.69
COL1A2P08123 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.35■□□□□ 0.69
COL1A2P08123 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.35■□□□□ 0.69
COL1A2P08123 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
COL1A2P08123 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL1A2P08123 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL1A2P08123 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL1A2P08123 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL1A2P08123 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL1A2P08123 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.35■□□□□ 0.69
COL1A2P08123 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL1A2P08123 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
COL1A2P08123 KRT18P3-201ENST00000451602 1288 ntBASIC19.34■□□□□ 0.69
COL1A2P08123 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
COL1A2P08123 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.34■□□□□ 0.69
COL1A2P08123 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.34■□□□□ 0.69
COL1A2P08123 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.34■□□□□ 0.69
COL1A2P08123 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.34■□□□□ 0.69
COL1A2P08123 AL805961.1-202ENST00000641562 540 ntBASIC19.34■□□□□ 0.69
COL1A2P08123 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
COL1A2P08123 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.34■□□□□ 0.69
COL1A2P08123 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.34■□□□□ 0.69
COL1A2P08123 GPR89P-201ENST00000407924 1495 ntBASIC19.34■□□□□ 0.69
COL1A2P08123 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
COL1A2P08123 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL1A2P08123 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.34■□□□□ 0.69
COL1A2P08123 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
COL1A2P08123 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL1A2P08123 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL1A2P08123 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL1A2P08123 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.34■□□□□ 0.69
COL1A2P08123 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
COL1A2P08123 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL1A2P08123 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL1A2P08123 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL1A2P08123 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
COL1A2P08123 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL1A2P08123 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.33■□□□□ 0.69
COL1A2P08123 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL1A2P08123 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.33■□□□□ 0.69
COL1A2P08123 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL1A2P08123 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL1A2P08123 BX842568.4-201ENST00000421222 227 ntBASIC19.33■□□□□ 0.69
COL1A2P08123 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
COL1A2P08123 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.69
COL1A2P08123 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.33■□□□□ 0.69
COL1A2P08123 RNA5SP416-201ENST00000516838 111 ntBASIC19.33■□□□□ 0.69
COL1A2P08123 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
COL1A2P08123 AL353135.1-201ENST00000606729 504 ntBASIC19.33■□□□□ 0.69
COL1A2P08123 AC008667.4-201ENST00000607370 168 ntBASIC19.33■□□□□ 0.69
COL1A2P08123 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL1A2P08123 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL1A2P08123 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.33■□□□□ 0.69
COL1A2P08123 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL1A2P08123 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL1A2P08123 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
COL1A2P08123 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL1A2P08123 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL1A2P08123 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.33■□□□□ 0.68
COL1A2P08123 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL1A2P08123 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.33■□□□□ 0.68
COL1A2P08123 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL1A2P08123 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL1A2P08123 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.33■□□□□ 0.68
COL1A2P08123 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
COL1A2P08123 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms