Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.28■■□□□ 1
CHGBP05060 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.28■■□□□ 1
CHGBP05060 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.28■■□□□ 1
CHGBP05060 AP000867.4-201ENST00000641616 219 ntBASIC21.28■■□□□ 1
CHGBP05060 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHGBP05060 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.28■■□□□ 1
CHGBP05060 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CHGBP05060 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHGBP05060 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.28■■□□□ 1
CHGBP05060 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.28■■□□□ 1
CHGBP05060 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHGBP05060 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHGBP05060 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHGBP05060 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.28■■□□□ 1
CHGBP05060 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.28■■□□□ 1
CHGBP05060 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.27■■□□□ 1
CHGBP05060 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHGBP05060 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHGBP05060 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHGBP05060 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CHGBP05060 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHGBP05060 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHGBP05060 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHGBP05060 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC21.27■■□□□ 1
CHGBP05060 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHGBP05060 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHGBP05060 DDX43P3-201ENST00000441064 443 ntBASIC21.27■■□□□ 1
CHGBP05060 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHGBP05060 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CHGBP05060 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHGBP05060 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CHGBP05060 AC148477.8-201ENST00000624298 468 ntBASIC21.27■■□□□ 1
CHGBP05060 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CHGBP05060 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.27■■□□□ 1
CHGBP05060 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.27■■□□□ 1
CHGBP05060 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHGBP05060 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHGBP05060 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.27■■□□□ 1
CHGBP05060 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.27■■□□□ 1
CHGBP05060 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
CHGBP05060 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHGBP05060 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CHGBP05060 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CHGBP05060 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CHGBP05060 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.27■□□□□ 0.99
CHGBP05060 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CHGBP05060 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CHGBP05060 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHGBP05060 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHGBP05060 AC148477.5-201ENST00000625164 1645 ntBASIC21.26■□□□□ 0.99
CHGBP05060 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.26■□□□□ 0.99
CHGBP05060 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHGBP05060 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
CHGBP05060 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CHGBP05060 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHGBP05060 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
CHGBP05060 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.26■□□□□ 0.99
CHGBP05060 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHGBP05060 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHGBP05060 MRPL3P1-201ENST00000400109 1033 ntBASIC21.26■□□□□ 0.99
CHGBP05060 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.26■□□□□ 0.99
CHGBP05060 ABCD1P5-201ENST00000445663 754 ntBASIC21.26■□□□□ 0.99
CHGBP05060 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CHGBP05060 FGFR3P6-201ENST00000457012 610 ntBASIC21.26■□□□□ 0.99
CHGBP05060 AC109462.3-201ENST00000573934 613 ntBASIC21.26■□□□□ 0.99
CHGBP05060 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CHGBP05060 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CHGBP05060 AP005117.1-201ENST00000584346 1413 ntBASIC21.26■□□□□ 0.99
CHGBP05060 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CHGBP05060 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.26■□□□□ 0.99
CHGBP05060 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.26■□□□□ 0.99
CHGBP05060 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.26■□□□□ 0.99
CHGBP05060 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHGBP05060 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.25■□□□□ 0.99
CHGBP05060 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CHGBP05060 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHGBP05060 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.25■□□□□ 0.99
CHGBP05060 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHGBP05060 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHGBP05060 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHGBP05060 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.25■□□□□ 0.99
CHGBP05060 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CHGBP05060 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CHGBP05060 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.25■□□□□ 0.99
CHGBP05060 SAPCD2P3-201ENST00000455031 850 ntBASIC21.25■□□□□ 0.99
CHGBP05060 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.25■□□□□ 0.99
CHGBP05060 AC122714.2-201ENST00000502787 707 ntBASIC21.25■□□□□ 0.99
CHGBP05060 PMPCAP1-201ENST00000508114 1576 ntBASIC21.25■□□□□ 0.99
CHGBP05060 AC106795.1-205ENST00000512851 1056 ntBASIC21.25■□□□□ 0.99
CHGBP05060 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHGBP05060 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC21.25■□□□□ 0.99
CHGBP05060 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHGBP05060 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHGBP05060 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.25■□□□□ 0.99
CHGBP05060 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHGBP05060 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CHGBP05060 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHGBP05060 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CHGBP05060 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.25■□□□□ 0.99
CHGBP05060 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms