Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
RAPGEF3O95398 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC26.35■■□□□ 1.81
RAPGEF3O95398 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC26.35■■□□□ 1.81
RAPGEF3O95398 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RAPGEF3O95398 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC26.35■■□□□ 1.81
RAPGEF3O95398 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC26.35■■□□□ 1.81
RAPGEF3O95398 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RAPGEF3O95398 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
RAPGEF3O95398 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC26.34■■□□□ 1.81
RAPGEF3O95398 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC26.34■■□□□ 1.81
RAPGEF3O95398 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RAPGEF3O95398 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC26.34■■□□□ 1.81
RAPGEF3O95398 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RAPGEF3O95398 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RAPGEF3O95398 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RAPGEF3O95398 SERBP1P5-201ENST00000510079 1181 ntBASIC26.34■■□□□ 1.81
RAPGEF3O95398 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC26.34■■□□□ 1.81
RAPGEF3O95398 IGHV3-42-201ENST00000520410 361 ntBASIC26.34■■□□□ 1.81
RAPGEF3O95398 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RAPGEF3O95398 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC26.34■■□□□ 1.81
RAPGEF3O95398 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC26.34■■□□□ 1.81
RAPGEF3O95398 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
RAPGEF3O95398 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RAPGEF3O95398 PC-208ENST00000529047 1607 ntTSL 3 BASIC26.34■■□□□ 1.81
RAPGEF3O95398 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RAPGEF3O95398 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RAPGEF3O95398 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC26.34■■□□□ 1.81
RAPGEF3O95398 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RAPGEF3O95398 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RAPGEF3O95398 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RAPGEF3O95398 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
RAPGEF3O95398 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RAPGEF3O95398 PHGDH-209ENST00000641074 1780 ntBASIC26.33■■□□□ 1.81
RAPGEF3O95398 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RAPGEF3O95398 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
RAPGEF3O95398 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
RAPGEF3O95398 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
RAPGEF3O95398 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RAPGEF3O95398 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
RAPGEF3O95398 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RAPGEF3O95398 NAA50-208ENST00000497255 789 ntTSL 5 BASIC26.33■■□□□ 1.81
RAPGEF3O95398 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC26.33■■□□□ 1.81
RAPGEF3O95398 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RAPGEF3O95398 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC26.33■■□□□ 1.81
RAPGEF3O95398 CYP51A1P2-201ENST00000419457 1499 ntBASIC26.33■■□□□ 1.81
RAPGEF3O95398 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RAPGEF3O95398 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.8
RAPGEF3O95398 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC26.33■■□□□ 1.8
RAPGEF3O95398 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
RAPGEF3O95398 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
RAPGEF3O95398 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
RAPGEF3O95398 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
RAPGEF3O95398 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
RAPGEF3O95398 AC140658.5-201ENST00000438532 169 ntBASIC26.32■■□□□ 1.8
RAPGEF3O95398 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC26.32■■□□□ 1.8
RAPGEF3O95398 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC26.32■■□□□ 1.8
RAPGEF3O95398 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RAPGEF3O95398 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC26.32■■□□□ 1.8
RAPGEF3O95398 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC26.32■■□□□ 1.8
RAPGEF3O95398 AL662799.1-202ENST00000614205 422 ntBASIC26.32■■□□□ 1.8
RAPGEF3O95398 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC26.32■■□□□ 1.8
RAPGEF3O95398 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC26.32■■□□□ 1.8
RAPGEF3O95398 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC26.32■■□□□ 1.8
RAPGEF3O95398 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RAPGEF3O95398 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC26.32■■□□□ 1.8
RAPGEF3O95398 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC26.32■■□□□ 1.8
RAPGEF3O95398 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC26.32■■□□□ 1.8
RAPGEF3O95398 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC26.32■■□□□ 1.8
RAPGEF3O95398 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RAPGEF3O95398 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC26.31■■□□□ 1.8
RAPGEF3O95398 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC26.31■■□□□ 1.8
RAPGEF3O95398 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RAPGEF3O95398 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC26.31■■□□□ 1.8
RAPGEF3O95398 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC26.31■■□□□ 1.8
RAPGEF3O95398 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC26.31■■□□□ 1.8
RAPGEF3O95398 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC26.31■■□□□ 1.8
RAPGEF3O95398 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
RAPGEF3O95398 AC097493.3-201ENST00000509725 367 ntBASIC26.31■■□□□ 1.8
RAPGEF3O95398 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC26.31■■□□□ 1.8
RAPGEF3O95398 AC026150.2-201ENST00000564693 1156 ntBASIC26.31■■□□□ 1.8
RAPGEF3O95398 AL135744.1-201ENST00000565098 629 ntBASIC26.31■■□□□ 1.8
RAPGEF3O95398 INO80E-210ENST00000567705 880 ntTSL 3 BASIC26.31■■□□□ 1.8
RAPGEF3O95398 COQ9-214ENST00000567933 882 ntTSL 3 BASIC26.31■■□□□ 1.8
RAPGEF3O95398 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
RAPGEF3O95398 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RAPGEF3O95398 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RAPGEF3O95398 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RAPGEF3O95398 SP100-208ENST00000427101 1922 ntTSL 2 BASIC26.31■■□□□ 1.8
RAPGEF3O95398 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RAPGEF3O95398 TDG-209ENST00000544861 1387 ntTSL 2 BASIC26.31■■□□□ 1.8
RAPGEF3O95398 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RAPGEF3O95398 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RAPGEF3O95398 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
RAPGEF3O95398 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RAPGEF3O95398 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
RAPGEF3O95398 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RAPGEF3O95398 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RAPGEF3O95398 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC26.3■■□□□ 1.8
RAPGEF3O95398 SPDYE14P-201ENST00000442619 822 ntBASIC26.3■■□□□ 1.8
RAPGEF3O95398 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms