Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UPK1BO75841 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.46■□□□□ 0.07
UPK1BO75841 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
UPK1BO75841 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.46■□□□□ 0.07
UPK1BO75841 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
UPK1BO75841 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UPK1BO75841 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
UPK1BO75841 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
UPK1BO75841 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
UPK1BO75841 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
UPK1BO75841 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
UPK1BO75841 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1BO75841 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.45■□□□□ 0.06
UPK1BO75841 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1BO75841 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1BO75841 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1BO75841 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.45■□□□□ 0.06
UPK1BO75841 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1BO75841 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1BO75841 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
UPK1BO75841 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.45■□□□□ 0.06
UPK1BO75841 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1BO75841 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1BO75841 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1BO75841 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1BO75841 AL109659.2-201ENST00000606809 1674 ntBASIC15.45■□□□□ 0.06
UPK1BO75841 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.45■□□□□ 0.06
UPK1BO75841 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.45■□□□□ 0.06
UPK1BO75841 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1BO75841 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
UPK1BO75841 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1BO75841 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC15.45■□□□□ 0.06
UPK1BO75841 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.45■□□□□ 0.06
UPK1BO75841 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
UPK1BO75841 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1BO75841 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1BO75841 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1BO75841 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1BO75841 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.45■□□□□ 0.06
UPK1BO75841 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1BO75841 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
UPK1BO75841 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.45■□□□□ 0.06
UPK1BO75841 AC046185.3-201ENST00000623228 1824 ntBASIC15.45■□□□□ 0.06
UPK1BO75841 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
UPK1BO75841 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1BO75841 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1BO75841 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1BO75841 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.45■□□□□ 0.06
UPK1BO75841 REXO1L11P-201ENST00000620964 1927 ntBASIC15.45■□□□□ 0.06
UPK1BO75841 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.45■□□□□ 0.06
UPK1BO75841 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
UPK1BO75841 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
UPK1BO75841 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1BO75841 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.44■□□□□ 0.06
UPK1BO75841 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1BO75841 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1BO75841 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1BO75841 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1BO75841 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1BO75841 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1BO75841 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1BO75841 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC15.44■□□□□ 0.06
UPK1BO75841 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1BO75841 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1BO75841 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.44■□□□□ 0.06
UPK1BO75841 AC008694.1-202ENST00000636953 945 ntBASIC15.44■□□□□ 0.06
UPK1BO75841 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1BO75841 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1BO75841 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1BO75841 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
UPK1BO75841 AC009102.3-201ENST00000623118 1491 ntBASIC15.44■□□□□ 0.06
UPK1BO75841 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1BO75841 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
UPK1BO75841 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1BO75841 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1BO75841 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1BO75841 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1BO75841 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1BO75841 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
UPK1BO75841 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.43■□□□□ 0.06
UPK1BO75841 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1BO75841 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1BO75841 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.43■□□□□ 0.06
UPK1BO75841 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1BO75841 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
UPK1BO75841 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1BO75841 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
UPK1BO75841 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
UPK1BO75841 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1BO75841 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1BO75841 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1BO75841 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
UPK1BO75841 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
UPK1BO75841 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1BO75841 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1BO75841 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1BO75841 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.43■□□□□ 0.06
UPK1BO75841 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1BO75841 AC006557.6-201ENST00000623071 864 ntBASIC15.43■□□□□ 0.06
UPK1BO75841 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms