Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.86■□□□□ 0.61
RCCD1A6NED2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RCCD1A6NED2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RCCD1A6NED2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RCCD1A6NED2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RCCD1A6NED2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RCCD1A6NED2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RCCD1A6NED2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RCCD1A6NED2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.85■□□□□ 0.61
RCCD1A6NED2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
RCCD1A6NED2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RCCD1A6NED2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RCCD1A6NED2 AC005915.1-201ENST00000624912 2018 ntBASIC18.85■□□□□ 0.61
RCCD1A6NED2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
RCCD1A6NED2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.85■□□□□ 0.61
RCCD1A6NED2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RCCD1A6NED2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RCCD1A6NED2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
RCCD1A6NED2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.85■□□□□ 0.61
RCCD1A6NED2 HMGA1P5-201ENST00000412453 271 ntBASIC18.85■□□□□ 0.61
RCCD1A6NED2 ECEL1P3-201ENST00000427961 737 ntBASIC18.85■□□□□ 0.61
RCCD1A6NED2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.85■□□□□ 0.61
RCCD1A6NED2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.85■□□□□ 0.61
RCCD1A6NED2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.85■□□□□ 0.61
RCCD1A6NED2 AC024563.2-201ENST00000603282 481 ntBASIC18.85■□□□□ 0.61
RCCD1A6NED2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RCCD1A6NED2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RCCD1A6NED2 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC18.85■□□□□ 0.61
RCCD1A6NED2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RCCD1A6NED2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RCCD1A6NED2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RCCD1A6NED2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.85■□□□□ 0.61
RCCD1A6NED2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RCCD1A6NED2 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RCCD1A6NED2 PCDH8P1-201ENST00000428983 2773 ntBASIC18.85■□□□□ 0.61
RCCD1A6NED2 HTR7P1-202ENST00000624664 4411 ntBASIC18.85■□□□□ 0.61
RCCD1A6NED2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RCCD1A6NED2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RCCD1A6NED2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.85■□□□□ 0.61
RCCD1A6NED2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RCCD1A6NED2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RCCD1A6NED2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.84■□□□□ 0.61
RCCD1A6NED2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RCCD1A6NED2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RCCD1A6NED2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RCCD1A6NED2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RCCD1A6NED2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RCCD1A6NED2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.84■□□□□ 0.61
RCCD1A6NED2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RCCD1A6NED2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RCCD1A6NED2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RCCD1A6NED2 SLC25A1P3-201ENST00000395415 828 ntBASIC18.84■□□□□ 0.61
RCCD1A6NED2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RCCD1A6NED2 AC005104.2-201ENST00000427818 678 ntBASIC18.84■□□□□ 0.61
RCCD1A6NED2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RCCD1A6NED2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.84■□□□□ 0.61
RCCD1A6NED2 NAPSB-206ENST00000562112 1266 ntBASIC18.84■□□□□ 0.61
RCCD1A6NED2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RCCD1A6NED2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.84■□□□□ 0.61
RCCD1A6NED2 AC004263.2-201ENST00000617183 678 ntBASIC18.84■□□□□ 0.61
RCCD1A6NED2 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RCCD1A6NED2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.84■□□□□ 0.61
RCCD1A6NED2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RCCD1A6NED2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RCCD1A6NED2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RCCD1A6NED2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RCCD1A6NED2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RCCD1A6NED2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RCCD1A6NED2 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.83■□□□□ 0.61
RCCD1A6NED2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.83■□□□□ 0.61
RCCD1A6NED2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RCCD1A6NED2 KRT17P2-201ENST00000300992 1314 ntBASIC18.83■□□□□ 0.61
RCCD1A6NED2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RCCD1A6NED2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RCCD1A6NED2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
RCCD1A6NED2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RCCD1A6NED2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.83■□□□□ 0.6
RCCD1A6NED2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RCCD1A6NED2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.83■□□□□ 0.6
RCCD1A6NED2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.83■□□□□ 0.6
RCCD1A6NED2 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.83■□□□□ 0.6
RCCD1A6NED2 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RCCD1A6NED2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.83■□□□□ 0.6
RCCD1A6NED2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RCCD1A6NED2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.83■□□□□ 0.6
RCCD1A6NED2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
RCCD1A6NED2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.83■□□□□ 0.6
RCCD1A6NED2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RCCD1A6NED2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RCCD1A6NED2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
RCCD1A6NED2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RCCD1A6NED2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RCCD1A6NED2 KRT89P-201ENST00000620027 1478 ntBASIC18.83■□□□□ 0.6
RCCD1A6NED2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RCCD1A6NED2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RCCD1A6NED2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
RCCD1A6NED2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RCCD1A6NED2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.83■□□□□ 0.6
RCCD1A6NED2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RCCD1A6NED2 AC016396.2-201ENST00000562575 1417 ntBASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms