Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 PP12613-201ENST00000424958 2230 ntBASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 AC009949.1-201ENST00000623048 1830 ntBASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
PTPDC1A2A3K4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPDC1A2A3K4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.86■□□□□ 0.93
PTPDC1A2A3K4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PTPDC1A2A3K4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPDC1A2A3K4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PTPDC1A2A3K4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PTPDC1A2A3K4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPDC1A2A3K4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPDC1A2A3K4 KRT18P31-201ENST00000506277 1292 ntBASIC20.86■□□□□ 0.93
PTPDC1A2A3K4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.86■□□□□ 0.93
PTPDC1A2A3K4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.86■□□□□ 0.93
PTPDC1A2A3K4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.86■□□□□ 0.93
PTPDC1A2A3K4 AC011840.4-201ENST00000578471 627 ntBASIC20.86■□□□□ 0.93
PTPDC1A2A3K4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.86■□□□□ 0.93
PTPDC1A2A3K4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.86■□□□□ 0.93
PTPDC1A2A3K4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PTPDC1A2A3K4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PTPDC1A2A3K4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PTPDC1A2A3K4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.86■□□□□ 0.93
PTPDC1A2A3K4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PTPDC1A2A3K4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPDC1A2A3K4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPDC1A2A3K4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPDC1A2A3K4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPDC1A2A3K4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPDC1A2A3K4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTPDC1A2A3K4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PTPDC1A2A3K4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPDC1A2A3K4 AC246785.2-201ENST00000432512 513 ntBASIC20.85■□□□□ 0.93
PTPDC1A2A3K4 EMBP1-201ENST00000458200 901 ntBASIC20.85■□□□□ 0.93
PTPDC1A2A3K4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.85■□□□□ 0.93
PTPDC1A2A3K4 AC091607.1-201ENST00000490318 1060 ntBASIC20.85■□□□□ 0.93
PTPDC1A2A3K4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.85■□□□□ 0.93
PTPDC1A2A3K4 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.85■□□□□ 0.93
PTPDC1A2A3K4 AP005901.3-202ENST00000581653 237 ntBASIC20.85■□□□□ 0.93
PTPDC1A2A3K4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.85■□□□□ 0.93
PTPDC1A2A3K4 LINC01711-201ENST00000598340 967 ntBASIC20.85■□□□□ 0.93
PTPDC1A2A3K4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.85■□□□□ 0.93
PTPDC1A2A3K4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTPDC1A2A3K4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPDC1A2A3K4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPDC1A2A3K4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPDC1A2A3K4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPDC1A2A3K4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTPDC1A2A3K4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.85■□□□□ 0.93
PTPDC1A2A3K4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.84■□□□□ 0.93
PTPDC1A2A3K4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPDC1A2A3K4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPDC1A2A3K4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPDC1A2A3K4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPDC1A2A3K4 TSPY12P-201ENST00000421279 868 ntBASIC20.84■□□□□ 0.93
PTPDC1A2A3K4 IGHV3-47-201ENST00000425060 335 ntBASIC20.84■□□□□ 0.93
PTPDC1A2A3K4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.84■□□□□ 0.93
PTPDC1A2A3K4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPDC1A2A3K4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.84■□□□□ 0.93
PTPDC1A2A3K4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.84■□□□□ 0.93
PTPDC1A2A3K4 AC009154.2-201ENST00000621177 724 ntBASIC20.84■□□□□ 0.93
PTPDC1A2A3K4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTPDC1A2A3K4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.84■□□□□ 0.93
PTPDC1A2A3K4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTPDC1A2A3K4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPDC1A2A3K4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTPDC1A2A3K4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PTPDC1A2A3K4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PTPDC1A2A3K4 NSUN5P1-202ENST00000421140 1535 ntBASIC20.83■□□□□ 0.93
PTPDC1A2A3K4 NSUN5P2-203ENST00000457352 1529 ntBASIC20.83■□□□□ 0.93
PTPDC1A2A3K4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPDC1A2A3K4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPDC1A2A3K4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPDC1A2A3K4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms