Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 AL441883.1-201ENST00000566170 1045 ntBASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 AC105020.1-201ENST00000435356 2205 ntBASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 LINC02012-201ENST00000608206 1725 ntBASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.59■□□□□ 0.25
TRBV5-3A0A0A0MS03 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.58■□□□□ 0.25
TRBV5-3A0A0A0MS03 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
TRBV5-3A0A0A0MS03 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRBV5-3A0A0A0MS03 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRBV5-3A0A0A0MS03 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRBV5-3A0A0A0MS03 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRBV5-3A0A0A0MS03 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 MTCL1P1-201ENST00000446207 792 ntBASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 AC068472.1-201ENST00000474589 881 ntBASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 AC002558.1-201ENST00000488906 803 ntBASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 AC145285.6-201ENST00000604632 637 ntBASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.58■□□□□ 0.24
TRBV5-3A0A0A0MS03 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms