Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 KRT8P47-201ENST00000604727 1398 ntBASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 AC099336.1-202ENST00000602961 463 ntBASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 PRORSD1P-202ENST00000563365 2154 ntBASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HRH3Q9Y5N1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 GUSBP12-201ENST00000513727 720 ntBASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 AL353801.3-201ENST00000609898 542 ntBASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HRH3Q9Y5N1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms