Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB13Q9Y5F0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PCDHB13Q9Y5F0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB13Q9Y5F0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 AC096633.1-201ENST00000422446 749 ntBASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 DRAXINP1-201ENST00000437611 948 ntBASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 AP002383.4-201ENST00000442518 975 ntBASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 VENTXP7-201ENST00000475503 772 ntBASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB13Q9Y5F0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 AC006518.1-201ENST00000541449 943 ntBASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 AP002414.4-201ENST00000589764 1148 ntBASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB13Q9Y5F0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB13Q9Y5F0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHB13Q9Y5F0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB13Q9Y5F0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms