Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 HCG4B-203ENST00000450128 991 ntBASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 RFPL4AP1-201ENST00000530883 850 ntBASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 C20orf181-201ENST00000623918 480 ntBASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 AC092865.6-201ENST00000642101 219 ntBASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
HDAC9Q9UKV0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 AC254562.1-201ENST00000417586 456 ntBASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 ALG1L5P-201ENST00000482043 771 ntBASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 CD63-210ENST00000550776 870 ntTSL 5 BASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 AC004790.2-201ENST00000623588 572 ntBASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC9Q9UKV0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 AC018845.2-201ENST00000568326 409 ntBASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 AC116407.2-201ENST00000613639 860 ntBASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 AC073592.3-201ENST00000625118 1834 ntBASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC9Q9UKV0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HDAC9Q9UKV0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HDAC9Q9UKV0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC21.14■□□□□ 0.98
HDAC9Q9UKV0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
HDAC9Q9UKV0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
HDAC9Q9UKV0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
HDAC9Q9UKV0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HDAC9Q9UKV0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HDAC9Q9UKV0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HDAC9Q9UKV0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HDAC9Q9UKV0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
HDAC9Q9UKV0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HDAC9Q9UKV0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HDAC9Q9UKV0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HDAC9Q9UKV0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms