Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
FBXO28Q9NVF7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
FBXO28Q9NVF7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
FBXO28Q9NVF7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.34■□□□□ 0.85
FBXO28Q9NVF7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FBXO28Q9NVF7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.34■□□□□ 0.85
FBXO28Q9NVF7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.34■□□□□ 0.85
FBXO28Q9NVF7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FBXO28Q9NVF7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
FBXO28Q9NVF7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
FBXO28Q9NVF7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
FBXO28Q9NVF7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FBXO28Q9NVF7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FBXO28Q9NVF7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
FBXO28Q9NVF7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FBXO28Q9NVF7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
FBXO28Q9NVF7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FBXO28Q9NVF7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.33■□□□□ 0.85
FBXO28Q9NVF7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
FBXO28Q9NVF7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.33■□□□□ 0.85
FBXO28Q9NVF7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.33■□□□□ 0.85
FBXO28Q9NVF7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.33■□□□□ 0.85
FBXO28Q9NVF7 AC108751.1-201ENST00000490852 363 ntBASIC20.33■□□□□ 0.85
FBXO28Q9NVF7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.33■□□□□ 0.85
FBXO28Q9NVF7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.33■□□□□ 0.85
FBXO28Q9NVF7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.33■□□□□ 0.85
FBXO28Q9NVF7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.33■□□□□ 0.85
FBXO28Q9NVF7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.33■□□□□ 0.85
FBXO28Q9NVF7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
FBXO28Q9NVF7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.33■□□□□ 0.85
FBXO28Q9NVF7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
FBXO28Q9NVF7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.33■□□□□ 0.84
FBXO28Q9NVF7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.33■□□□□ 0.84
FBXO28Q9NVF7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
FBXO28Q9NVF7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
FBXO28Q9NVF7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
FBXO28Q9NVF7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
FBXO28Q9NVF7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
FBXO28Q9NVF7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.33■□□□□ 0.84
FBXO28Q9NVF7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
FBXO28Q9NVF7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
FBXO28Q9NVF7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 AC010327.4-202ENST00000591484 748 ntBASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 AC116407.2-201ENST00000613639 860 ntBASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 BX276092.7-203ENST00000637198 1536 ntBASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
FBXO28Q9NVF7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.31■□□□□ 0.84
FBXO28Q9NVF7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
FBXO28Q9NVF7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO28Q9NVF7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO28Q9NVF7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO28Q9NVF7 AC003669.1-201ENST00000334569 611 ntBASIC20.31■□□□□ 0.84
FBXO28Q9NVF7 AC005104.2-201ENST00000427818 678 ntBASIC20.31■□□□□ 0.84
FBXO28Q9NVF7 DDX43P3-201ENST00000441064 443 ntBASIC20.31■□□□□ 0.84
FBXO28Q9NVF7 KRT18P2-201ENST00000447938 1258 ntBASIC20.31■□□□□ 0.84
FBXO28Q9NVF7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.31■□□□□ 0.84
FBXO28Q9NVF7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.31■□□□□ 0.84
FBXO28Q9NVF7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.31■□□□□ 0.84
FBXO28Q9NVF7 STK25P1-201ENST00000585406 838 ntBASIC20.31■□□□□ 0.84
FBXO28Q9NVF7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO28Q9NVF7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
FBXO28Q9NVF7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
FBXO28Q9NVF7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO28Q9NVF7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO28Q9NVF7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO28Q9NVF7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO28Q9NVF7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
FBXO28Q9NVF7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.31■□□□□ 0.84
FBXO28Q9NVF7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO28Q9NVF7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO28Q9NVF7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms