Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
BLOC1S4Q9NUP1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.72■□□□□ 0.75
BLOC1S4Q9NUP1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BLOC1S4Q9NUP1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
BLOC1S4Q9NUP1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BLOC1S4Q9NUP1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.72■□□□□ 0.75
BLOC1S4Q9NUP1 UPK3BP1-201ENST00000428678 509 ntBASIC19.72■□□□□ 0.75
BLOC1S4Q9NUP1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
BLOC1S4Q9NUP1 VENTXP7-201ENST00000475503 772 ntBASIC19.72■□□□□ 0.75
BLOC1S4Q9NUP1 AC122714.2-201ENST00000502787 707 ntBASIC19.72■□□□□ 0.75
BLOC1S4Q9NUP1 AC009533.2-201ENST00000543664 586 ntBASIC19.72■□□□□ 0.75
BLOC1S4Q9NUP1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.72■□□□□ 0.75
BLOC1S4Q9NUP1 AC011467.2-201ENST00000598425 242 ntBASIC19.72■□□□□ 0.75
BLOC1S4Q9NUP1 Z69720.1-201ENST00000601483 472 ntBASIC19.72■□□□□ 0.75
BLOC1S4Q9NUP1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BLOC1S4Q9NUP1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BLOC1S4Q9NUP1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
BLOC1S4Q9NUP1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
BLOC1S4Q9NUP1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 AC092329.2-201ENST00000598402 547 ntBASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
BLOC1S4Q9NUP1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 AP000867.3-201ENST00000524675 377 ntBASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 AC074051.2-201ENST00000565115 352 ntBASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 TP73-AS1-210ENST00000637775 1455 ntBASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 AL049757.1-201ENST00000616842 1596 ntBASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BLOC1S4Q9NUP1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
BLOC1S4Q9NUP1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
BLOC1S4Q9NUP1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
BLOC1S4Q9NUP1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
BLOC1S4Q9NUP1 LYSMD4-203ENST00000378904 2122 ntBASIC19.69■□□□□ 0.74
BLOC1S4Q9NUP1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BLOC1S4Q9NUP1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
BLOC1S4Q9NUP1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BLOC1S4Q9NUP1 FAM220CP-201ENST00000395253 831 ntBASIC19.69■□□□□ 0.74
BLOC1S4Q9NUP1 AC002558.1-201ENST00000488906 803 ntBASIC19.69■□□□□ 0.74
BLOC1S4Q9NUP1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BLOC1S4Q9NUP1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.69■□□□□ 0.74
BLOC1S4Q9NUP1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.69■□□□□ 0.74
BLOC1S4Q9NUP1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.69■□□□□ 0.74
BLOC1S4Q9NUP1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.69■□□□□ 0.74
BLOC1S4Q9NUP1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BLOC1S4Q9NUP1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BLOC1S4Q9NUP1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
BLOC1S4Q9NUP1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BLOC1S4Q9NUP1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
BLOC1S4Q9NUP1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
BLOC1S4Q9NUP1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms