Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 HCG4P8-203ENST00000443049 980 ntBASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 KRT17P6-201ENST00000453795 1220 ntBASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 MINOS1P3-201ENST00000457048 203 ntBASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 AP000867.3-201ENST00000524675 377 ntBASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 AC009533.2-201ENST00000543664 586 ntBASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 AC012615.1-201ENST00000565797 1299 ntBASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 MIR3180-1-201ENST00000580374 94 ntBASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 MIR3180-3-201ENST00000584616 94 ntBASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SDHAF3Q9NRP4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 AL139384.1-201ENST00000612143 3047 ntBASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 DDX43P3-201ENST00000441064 443 ntBASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SDHAF3Q9NRP4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 AC074051.2-201ENST00000565115 352 ntBASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 MIR3652-201ENST00000579335 131 ntBASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 CROCCP1-201ENST00000426910 5675 ntBASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SDHAF3Q9NRP4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms