Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 AC008735.5-201ENST00000623544 497 ntBASIC18.35■□□□□ 0.53
HPS4Q9NQG7 PKD1P1-201ENST00000458669 6805 ntBASIC18.35■□□□□ 0.53
HPS4Q9NQG7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 AL031598.1-201ENST00000561511 1773 ntBASIC18.35■□□□□ 0.53
HPS4Q9NQG7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 BX842568.4-201ENST00000421222 227 ntBASIC18.34■□□□□ 0.53
HPS4Q9NQG7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
HPS4Q9NQG7 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.33■□□□□ 0.53
HPS4Q9NQG7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HPS4Q9NQG7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HPS4Q9NQG7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HPS4Q9NQG7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HPS4Q9NQG7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HPS4Q9NQG7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
HPS4Q9NQG7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HPS4Q9NQG7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HPS4Q9NQG7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.33■□□□□ 0.53
HPS4Q9NQG7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 MIR1233-2-201ENST00000408138 82 ntBASIC18.33■□□□□ 0.52
HPS4Q9NQG7 MIR1233-1-201ENST00000408722 82 ntBASIC18.33■□□□□ 0.52
HPS4Q9NQG7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 RNA5SP415-201ENST00000517246 115 ntBASIC18.33■□□□□ 0.52
HPS4Q9NQG7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 AC140113.2-201ENST00000604370 208 ntBASIC18.33■□□□□ 0.52
HPS4Q9NQG7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 AC107918.4-202ENST00000641623 219 ntBASIC18.33■□□□□ 0.52
HPS4Q9NQG7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 AC010460.3-201ENST00000511359 1579 ntBASIC18.33■□□□□ 0.52
HPS4Q9NQG7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.33■□□□□ 0.52
HPS4Q9NQG7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms