Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC68Q9H2F9 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC68Q9H2F9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC68Q9H2F9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CCDC68Q9H2F9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC68Q9H2F9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
CCDC68Q9H2F9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC68Q9H2F9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC68Q9H2F9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC68Q9H2F9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC68Q9H2F9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC68Q9H2F9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.83■□□□□ 0.45
CCDC68Q9H2F9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC68Q9H2F9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC68Q9H2F9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.45
CCDC68Q9H2F9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
CCDC68Q9H2F9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC68Q9H2F9 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC68Q9H2F9 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CCDC68Q9H2F9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.83■□□□□ 0.45
CCDC68Q9H2F9 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CCDC68Q9H2F9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC68Q9H2F9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC68Q9H2F9 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC68Q9H2F9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 KRT18P65-201ENST00000439811 1286 ntBASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CCDC68Q9H2F9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 LINC01238-205ENST00000567549 1107 ntBASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 AC006116.8-202ENST00000587620 1550 ntBASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC68Q9H2F9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC68Q9H2F9 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC68Q9H2F9 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CCDC68Q9H2F9 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC68Q9H2F9 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CCDC68Q9H2F9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms