Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRIM2Q9C040 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM2Q9C040 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM2Q9C040 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.37■□□□□ 0.21
TRIM2Q9C040 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRIM2Q9C040 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM2Q9C040 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
TRIM2Q9C040 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM2Q9C040 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM2Q9C040 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRIM2Q9C040 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRIM2Q9C040 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM2Q9C040 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM2Q9C040 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM2Q9C040 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM2Q9C040 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM2Q9C040 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM2Q9C040 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM2Q9C040 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRIM2Q9C040 HOMER2P1-201ENST00000455653 964 ntBASIC16.37■□□□□ 0.21
TRIM2Q9C040 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.37■□□□□ 0.21
TRIM2Q9C040 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
TRIM2Q9C040 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.37■□□□□ 0.21
TRIM2Q9C040 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.37■□□□□ 0.21
TRIM2Q9C040 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.37■□□□□ 0.21
TRIM2Q9C040 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM2Q9C040 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM2Q9C040 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.37■□□□□ 0.21
TRIM2Q9C040 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM2Q9C040 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM2Q9C040 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM2Q9C040 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM2Q9C040 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRIM2Q9C040 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRIM2Q9C040 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRIM2Q9C040 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM2Q9C040 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
TRIM2Q9C040 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM2Q9C040 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRIM2Q9C040 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM2Q9C040 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
TRIM2Q9C040 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM2Q9C040 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRIM2Q9C040 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM2Q9C040 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRIM2Q9C040 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM2Q9C040 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM2Q9C040 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM2Q9C040 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM2Q9C040 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM2Q9C040 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.36■□□□□ 0.21
TRIM2Q9C040 TSPY12P-201ENST00000421279 868 ntBASIC16.36■□□□□ 0.21
TRIM2Q9C040 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM2Q9C040 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.36■□□□□ 0.21
TRIM2Q9C040 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM2Q9C040 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.36■□□□□ 0.21
TRIM2Q9C040 AC004263.2-201ENST00000617183 678 ntBASIC16.36■□□□□ 0.21
TRIM2Q9C040 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM2Q9C040 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRIM2Q9C040 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM2Q9C040 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM2Q9C040 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM2Q9C040 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM2Q9C040 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM2Q9C040 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM2Q9C040 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRIM2Q9C040 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM2Q9C040 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM2Q9C040 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
TRIM2Q9C040 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM2Q9C040 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRIM2Q9C040 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM2Q9C040 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM2Q9C040 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM2Q9C040 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM2Q9C040 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM2Q9C040 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRIM2Q9C040 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM2Q9C040 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM2Q9C040 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM2Q9C040 AC133963.1-201ENST00000504166 1679 ntBASIC16.35■□□□□ 0.21
TRIM2Q9C040 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM2Q9C040 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM2Q9C040 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM2Q9C040 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM2Q9C040 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM2Q9C040 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM2Q9C040 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM2Q9C040 AL031133.1-201ENST00000406807 723 ntBASIC16.35■□□□□ 0.21
TRIM2Q9C040 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM2Q9C040 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM2Q9C040 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM2Q9C040 DDX43P3-201ENST00000441064 443 ntBASIC16.35■□□□□ 0.21
TRIM2Q9C040 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM2Q9C040 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM2Q9C040 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM2Q9C040 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM2Q9C040 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM2Q9C040 ZNF444P1-201ENST00000559497 298 ntBASIC16.35■□□□□ 0.21
TRIM2Q9C040 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms