Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 NTF6B-201ENST00000591913 560 ntBASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 AL353801.3-201ENST00000609898 542 ntBASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHB18PQ96TA0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 AL592071.1-201ENST00000611956 408 ntBASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 LYSMD4-203ENST00000378904 2122 ntBASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
PCDHB18PQ96TA0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 AC097374.2-201ENST00000618617 1306 ntBASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 FAM86EP-206ENST00000510506 987 ntBASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 AC124864.1-201ENST00000623408 392 ntBASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
PCDHB18PQ96TA0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms