Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.03■□□□□ 0.8
FGD4Q96M96 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.03■□□□□ 0.8
FGD4Q96M96 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.03■□□□□ 0.8
FGD4Q96M96 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
FGD4Q96M96 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FGD4Q96M96 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.03■□□□□ 0.8
FGD4Q96M96 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FGD4Q96M96 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FGD4Q96M96 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.03■□□□□ 0.8
FGD4Q96M96 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
FGD4Q96M96 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
FGD4Q96M96 AL020989.1-201ENST00000422979 469 ntBASIC20.03■□□□□ 0.8
FGD4Q96M96 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.03■□□□□ 0.8
FGD4Q96M96 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
FGD4Q96M96 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FGD4Q96M96 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.03■□□□□ 0.8
FGD4Q96M96 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
FGD4Q96M96 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FGD4Q96M96 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
FGD4Q96M96 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.03■□□□□ 0.8
FGD4Q96M96 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.03■□□□□ 0.8
FGD4Q96M96 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FGD4Q96M96 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.02■□□□□ 0.8
FGD4Q96M96 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FGD4Q96M96 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.02■□□□□ 0.8
FGD4Q96M96 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
FGD4Q96M96 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FGD4Q96M96 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FGD4Q96M96 AC018445.3-201ENST00000624177 1945 ntBASIC20.02■□□□□ 0.8
FGD4Q96M96 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
FGD4Q96M96 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FGD4Q96M96 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
FGD4Q96M96 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
FGD4Q96M96 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
FGD4Q96M96 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
FGD4Q96M96 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.02■□□□□ 0.8
FGD4Q96M96 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.02■□□□□ 0.8
FGD4Q96M96 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.02■□□□□ 0.8
FGD4Q96M96 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
FGD4Q96M96 MIR1199-201ENST00000621445 119 ntBASIC20.02■□□□□ 0.8
FGD4Q96M96 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.02■□□□□ 0.8
FGD4Q96M96 AC005593.1-201ENST00000624894 515 ntBASIC20.02■□□□□ 0.8
FGD4Q96M96 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
FGD4Q96M96 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.02■□□□□ 0.8
FGD4Q96M96 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FGD4Q96M96 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FGD4Q96M96 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.02■□□□□ 0.8
FGD4Q96M96 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FGD4Q96M96 WIZP1-201ENST00000531444 2299 ntBASIC20.02■□□□□ 0.8
FGD4Q96M96 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.02■□□□□ 0.8
FGD4Q96M96 AP000974.1-201ENST00000623909 2387 ntBASIC20.02■□□□□ 0.8
FGD4Q96M96 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
FGD4Q96M96 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FGD4Q96M96 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FGD4Q96M96 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
FGD4Q96M96 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
FGD4Q96M96 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
FGD4Q96M96 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.01■□□□□ 0.79
FGD4Q96M96 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FGD4Q96M96 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FGD4Q96M96 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FGD4Q96M96 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.01■□□□□ 0.79
FGD4Q96M96 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.01■□□□□ 0.79
FGD4Q96M96 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.01■□□□□ 0.79
FGD4Q96M96 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FGD4Q96M96 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.01■□□□□ 0.79
FGD4Q96M96 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.01■□□□□ 0.79
FGD4Q96M96 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.01■□□□□ 0.79
FGD4Q96M96 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.01■□□□□ 0.79
FGD4Q96M96 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.01■□□□□ 0.79
FGD4Q96M96 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.01■□□□□ 0.79
FGD4Q96M96 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FGD4Q96M96 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
FGD4Q96M96 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.01■□□□□ 0.79
FGD4Q96M96 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.01■□□□□ 0.79
FGD4Q96M96 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.01■□□□□ 0.79
FGD4Q96M96 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.01■□□□□ 0.79
FGD4Q96M96 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FGD4Q96M96 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
FGD4Q96M96 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FGD4Q96M96 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FGD4Q96M96 AC135776.1-201ENST00000319817 2481 ntBASIC20■□□□□ 0.79
FGD4Q96M96 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20■□□□□ 0.79
FGD4Q96M96 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20■□□□□ 0.79
FGD4Q96M96 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20■□□□□ 0.79
FGD4Q96M96 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20■□□□□ 0.79
FGD4Q96M96 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FGD4Q96M96 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
FGD4Q96M96 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20■□□□□ 0.79
FGD4Q96M96 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
FGD4Q96M96 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
FGD4Q96M96 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20■□□□□ 0.79
FGD4Q96M96 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20■□□□□ 0.79
FGD4Q96M96 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20■□□□□ 0.79
FGD4Q96M96 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20■□□□□ 0.79
FGD4Q96M96 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20■□□□□ 0.79
FGD4Q96M96 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
FGD4Q96M96 AP001160.2-201ENST00000596071 487 ntBASIC20■□□□□ 0.79
FGD4Q96M96 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20■□□□□ 0.79
FGD4Q96M96 PGM5P2-202ENST00000637225 1043 ntBASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms