Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 AL160237.2-201ENST00000556165 472 ntBASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 AC104692.2-201ENST00000603054 253 ntBASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 AD001527.2-201ENST00000622994 785 ntBASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 AP000867.4-201ENST00000641616 219 ntBASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCD1Q96GM5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 AC026396.1-201ENST00000419388 421 ntBASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 FGFR3P6-201ENST00000457012 610 ntBASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SMARCD1Q96GM5 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SMARCD1Q96GM5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SMARCD1Q96GM5 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCD1Q96GM5 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCD1Q96GM5 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCD1Q96GM5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCD1Q96GM5 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCD1Q96GM5 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCD1Q96GM5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCD1Q96GM5 AP002469.2-201ENST00000531724 424 ntBASIC18.64■□□□□ 0.57
SMARCD1Q96GM5 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.64■□□□□ 0.57
SMARCD1Q96GM5 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCD1Q96GM5 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.64■□□□□ 0.57
SMARCD1Q96GM5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.64■□□□□ 0.57
SMARCD1Q96GM5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.64■□□□□ 0.57
SMARCD1Q96GM5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCD1Q96GM5 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.64■□□□□ 0.57
SMARCD1Q96GM5 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.64■□□□□ 0.57
SMARCD1Q96GM5 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCD1Q96GM5 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCD1Q96GM5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
SMARCD1Q96GM5 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCD1Q96GM5 PMPCAP1-201ENST00000508114 1576 ntBASIC18.64■□□□□ 0.57
SMARCD1Q96GM5 AL049757.1-201ENST00000616842 1596 ntBASIC18.64■□□□□ 0.57
SMARCD1Q96GM5 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCD1Q96GM5 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 SCARNA2-201ENST00000458748 420 ntBASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 AC019129.2-201ENST00000609837 1235 ntBASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 TP73-AS1-207ENST00000624167 988 ntBASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 KRT8P10-201ENST00000450021 1447 ntBASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 AL353593.2-201ENST00000602529 1483 ntBASIC18.63■□□□□ 0.57
SMARCD1Q96GM5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms