Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SPDL1Q96EA4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SPDL1Q96EA4 PHGDH-209ENST00000641074 1780 ntBASIC17.58■□□□□ 0.41
SPDL1Q96EA4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SPDL1Q96EA4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SPDL1Q96EA4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SPDL1Q96EA4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SPDL1Q96EA4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SPDL1Q96EA4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SPDL1Q96EA4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.58■□□□□ 0.41
SPDL1Q96EA4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SPDL1Q96EA4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SPDL1Q96EA4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SPDL1Q96EA4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPDL1Q96EA4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPDL1Q96EA4 AC008622.2-201ENST00000617006 1229 ntBASIC17.58■□□□□ 0.4
SPDL1Q96EA4 AC130371.2-201ENST00000619443 611 ntBASIC17.58■□□□□ 0.4
SPDL1Q96EA4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SPDL1Q96EA4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SPDL1Q96EA4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.58■□□□□ 0.4
SPDL1Q96EA4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.58■□□□□ 0.4
SPDL1Q96EA4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SPDL1Q96EA4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.58■□□□□ 0.4
SPDL1Q96EA4 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.58■□□□□ 0.4
SPDL1Q96EA4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.58■□□□□ 0.4
SPDL1Q96EA4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPDL1Q96EA4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPDL1Q96EA4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 AL353807.1-201ENST00000427475 662 ntBASIC17.57■□□□□ 0.4
SPDL1Q96EA4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 RN7SL471P-201ENST00000580476 299 ntBASIC17.57■□□□□ 0.4
SPDL1Q96EA4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 CR392000.1-201ENST00000624770 1228 ntBASIC17.57■□□□□ 0.4
SPDL1Q96EA4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.57■□□□□ 0.4
SPDL1Q96EA4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 AC105020.1-201ENST00000435356 2205 ntBASIC17.56■□□□□ 0.4
SPDL1Q96EA4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPDL1Q96EA4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms