Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 AC092364.2-202ENST00000597012 1073 ntBASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 AC106028.4-201ENST00000614509 607 ntBASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.9■□□□□ 0.14
SNRNP40Q96DI7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.89■□□□□ 0.14
SNRNP40Q96DI7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SNRNP40Q96DI7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNRNP40Q96DI7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SNRNP40Q96DI7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNRNP40Q96DI7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.89■□□□□ 0.13
SNRNP40Q96DI7 AL049757.1-201ENST00000616842 1596 ntBASIC15.89■□□□□ 0.13
SNRNP40Q96DI7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.89■□□□□ 0.13
SNRNP40Q96DI7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNRNP40Q96DI7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.89■□□□□ 0.13
SNRNP40Q96DI7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
SNRNP40Q96DI7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.89■□□□□ 0.13
SNRNP40Q96DI7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.89■□□□□ 0.13
SNRNP40Q96DI7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.89■□□□□ 0.13
SNRNP40Q96DI7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.89■□□□□ 0.13
SNRNP40Q96DI7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.89■□□□□ 0.13
SNRNP40Q96DI7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNRNP40Q96DI7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNRNP40Q96DI7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNRNP40Q96DI7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.89■□□□□ 0.13
SNRNP40Q96DI7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SNRNP40Q96DI7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SNRNP40Q96DI7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SNRNP40Q96DI7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNRNP40Q96DI7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SNRNP40Q96DI7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNRNP40Q96DI7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 FAM8A3P-201ENST00000427218 844 ntBASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 SIGLEC30P-201ENST00000455569 941 ntBASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.88■□□□□ 0.13
SNRNP40Q96DI7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms