Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LRRC39Q96DD0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRC39Q96DD0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC39Q96DD0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC39Q96DD0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC39Q96DD0 AC012313.1-201ENST00000593393 3059 ntBASIC17.94■□□□□ 0.46
LRRC39Q96DD0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC39Q96DD0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC39Q96DD0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRC39Q96DD0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC39Q96DD0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC39Q96DD0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC39Q96DD0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC39Q96DD0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.93■□□□□ 0.46
LRRC39Q96DD0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.93■□□□□ 0.46
LRRC39Q96DD0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.93■□□□□ 0.46
LRRC39Q96DD0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC39Q96DD0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC39Q96DD0 AC022211.2-201ENST00000585075 2527 ntBASIC17.93■□□□□ 0.46
LRRC39Q96DD0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC39Q96DD0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LRRC39Q96DD0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC39Q96DD0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC39Q96DD0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.93■□□□□ 0.46
LRRC39Q96DD0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LRRC39Q96DD0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.93■□□□□ 0.46
LRRC39Q96DD0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.93■□□□□ 0.46
LRRC39Q96DD0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC39Q96DD0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.93■□□□□ 0.46
LRRC39Q96DD0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC39Q96DD0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC39Q96DD0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC39Q96DD0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC39Q96DD0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC39Q96DD0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.92■□□□□ 0.46
LRRC39Q96DD0 STARP1-201ENST00000397973 869 ntBASIC17.92■□□□□ 0.46
LRRC39Q96DD0 FAM8A6P-201ENST00000407496 1135 ntBASIC17.92■□□□□ 0.46
LRRC39Q96DD0 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 SLC25A3P1-201ENST00000443844 931 ntBASIC17.92■□□□□ 0.46
LRRC39Q96DD0 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC39Q96DD0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.91■□□□□ 0.46
LRRC39Q96DD0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 COX11P1-201ENST00000489116 835 ntBASIC17.91■□□□□ 0.46
LRRC39Q96DD0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC39Q96DD0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.9■□□□□ 0.46
LRRC39Q96DD0 LYSMD4-203ENST00000378904 2122 ntBASIC17.9■□□□□ 0.46
LRRC39Q96DD0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC39Q96DD0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms